Analysis of interatomic Contacts of Structural Units in PDB entry:
8ZUJ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8ZUJ entry

There are 30 chains in PDB entry 8ZUJ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	PRO 18	PRO 41
B	PRO 18	PRO 41
C	PRO 18	PRO 41
D	VAL 142	LEU 285
E	VAL 142	LEU 285
F	VAL 142	LEU 285
G	PRO 18	PRO 41
H	PRO 18	PRO 41
I	PRO 18	PRO 41
J	VAL 142	LEU 285
K	VAL 142	LEU 285
L	VAL 142	LEU 285
M	PRO 18	PRO 41
N	PRO 18	PRO 41
O	PRO 18	PRO 41
P	VAL 142	LEU 285
Q	VAL 142	LEU 285
R	VAL 142	LEU 285
S	PRO 18	PRO 41
T	PRO 18	PRO 41
U	PRO 18	PRO 41
V	VAL 142	LEU 285
W	VAL 142	LEU 285
X	VAL 142	LEU 285
Y	PRO 18	PRO 41
Z	PRO 18	PRO 41
a	PRO 18	PRO 41
b	VAL 142	LEU 285
c	VAL 142	LEU 285
d	VAL 142	LEU 285

There are 15 helices in PDB entry 8ZUJ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	36	38	Right-handed 310
Helix 2	AA2	B	36	38	Right-handed 310
Helix 3	AA3	C	36	38	Right-handed 310
Helix 4	AA4	G	36	38	Right-handed 310
Helix 5	AA5	H	36	38	Right-handed 310
Helix 6	AA6	I	36	38	Right-handed 310
Helix 7	AA7	M	36	38	Right-handed 310
Helix 8	AA8	N	36	38	Right-handed 310
Helix 9	AA9	O	36	38	Right-handed 310
Helix 10	AB1	S	36	38	Right-handed 310
Helix 11	AB2	T	36	38	Right-handed 310
Helix 12	AB3	U	36	38	Right-handed 310
Helix 13	AB4	Y	36	38	Right-handed 310
Helix 14	AB5	Z	36	38	Right-handed 310
Helix 15	AB6	a	36	38	Right-handed 310

There are 60 sheets in PDB entry 8ZUJ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1, AF2, AF3, AF4, AF5, AF6, AF7, AF8, AF9, AG1, AG2, AG3, AG4, AG5, AG6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	23	26	first strand
Strand 2	A	31	34	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	23	26	first strand
Strand 2	B	31	34	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	23	26	first strand
Strand 2	C	31	34	anti-parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	168	174	first strand
Strand 2	D	146	151	anti-parallel
Strand 3	D	278	283	anti-parallel
Strand 4	D	191	201	anti-parallel
Strand 5	D	243	253	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	158	159	first strand
Strand 2	D	164	165	anti-parallel
Strand 3	D	258	263	anti-parallel
Strand 4	D	185	187	anti-parallel
Strand 5	D	178	180	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	158	159	first strand
Strand 2	D	164	165	anti-parallel
Strand 3	D	258	263	anti-parallel
Strand 4	D	207	215	anti-parallel
Strand 5	D	226	235	anti-parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	168	174	first strand
Strand 2	E	146	151	anti-parallel
Strand 3	E	278	283	anti-parallel
Strand 4	E	191	201	anti-parallel
Strand 5	E	243	253	anti-parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	158	159	first strand
Strand 2	E	164	165	anti-parallel
Strand 3	E	258	263	anti-parallel
Strand 4	E	185	187	anti-parallel
Strand 5	E	178	180	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	158	159	first strand
Strand 2	E	164	165	anti-parallel
Strand 3	E	258	263	anti-parallel
Strand 4	E	207	215	anti-parallel
Strand 5	E	226	235	anti-parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	168	174	first strand
Strand 2	F	146	151	anti-parallel
Strand 3	F	278	283	anti-parallel
Strand 4	F	191	201	anti-parallel
Strand 5	F	243	253	anti-parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	158	159	first strand
Strand 2	F	164	165	anti-parallel
Strand 3	F	258	263	anti-parallel
Strand 4	F	185	187	anti-parallel
Strand 5	F	178	180	anti-parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	158	159	first strand
Strand 2	F	164	165	anti-parallel
Strand 3	F	258	263	anti-parallel
Strand 4	F	207	215	anti-parallel
Strand 5	F	226	235	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	23	26	first strand
Strand 2	G	31	34	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	23	26	first strand
Strand 2	H	31	34	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	23	26	first strand
Strand 2	I	31	34	anti-parallel

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There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	168	174	first strand
Strand 2	J	146	151	anti-parallel
Strand 3	J	278	283	anti-parallel
Strand 4	J	191	201	anti-parallel
Strand 5	J	243	253	anti-parallel

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There are 5 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	158	159	first strand
Strand 2	J	164	165	anti-parallel
Strand 3	J	258	263	anti-parallel
Strand 4	J	185	187	anti-parallel
Strand 5	J	178	180	anti-parallel

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There are 5 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	158	159	first strand
Strand 2	J	164	165	anti-parallel
Strand 3	J	258	263	anti-parallel
Strand 4	J	207	215	anti-parallel
Strand 5	J	226	235	anti-parallel

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There are 5 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	168	174	first strand
Strand 2	K	146	151	anti-parallel
Strand 3	K	278	283	anti-parallel
Strand 4	K	191	201	anti-parallel
Strand 5	K	243	253	anti-parallel

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There are 5 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	158	159	first strand
Strand 2	K	164	165	anti-parallel
Strand 3	K	258	263	anti-parallel
Strand 4	K	185	187	anti-parallel
Strand 5	K	178	180	anti-parallel

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There are 5 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	158	159	first strand
Strand 2	K	164	165	anti-parallel
Strand 3	K	258	263	anti-parallel
Strand 4	K	207	215	anti-parallel
Strand 5	K	226	235	anti-parallel

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There are 5 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	168	174	first strand
Strand 2	L	146	151	anti-parallel
Strand 3	L	278	283	anti-parallel
Strand 4	L	191	201	anti-parallel
Strand 5	L	243	253	anti-parallel

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There are 5 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	158	159	first strand
Strand 2	L	164	165	anti-parallel
Strand 3	L	258	263	anti-parallel
Strand 4	L	185	187	anti-parallel
Strand 5	L	178	180	anti-parallel

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There are 5 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	158	159	first strand
Strand 2	L	164	165	anti-parallel
Strand 3	L	258	263	anti-parallel
Strand 4	L	207	215	anti-parallel
Strand 5	L	226	235	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	23	26	first strand
Strand 2	M	31	34	anti-parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	23	26	first strand
Strand 2	N	31	34	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	23	26	first strand
Strand 2	O	31	34	anti-parallel

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There are 5 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	168	174	first strand
Strand 2	P	146	151	anti-parallel
Strand 3	P	278	283	anti-parallel
Strand 4	P	191	201	anti-parallel
Strand 5	P	243	253	anti-parallel

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There are 5 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	158	159	first strand
Strand 2	P	164	165	anti-parallel
Strand 3	P	258	263	anti-parallel
Strand 4	P	185	187	anti-parallel
Strand 5	P	178	180	anti-parallel

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There are 5 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	158	159	first strand
Strand 2	P	164	165	anti-parallel
Strand 3	P	258	263	anti-parallel
Strand 4	P	207	215	anti-parallel
Strand 5	P	226	235	anti-parallel

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There are 5 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	168	174	first strand
Strand 2	Q	146	151	anti-parallel
Strand 3	Q	278	283	anti-parallel
Strand 4	Q	191	201	anti-parallel
Strand 5	Q	243	253	anti-parallel

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There are 5 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	158	159	first strand
Strand 2	Q	164	165	anti-parallel
Strand 3	Q	258	263	anti-parallel
Strand 4	Q	185	187	anti-parallel
Strand 5	Q	178	180	anti-parallel

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There are 5 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	158	159	first strand
Strand 2	Q	164	165	anti-parallel
Strand 3	Q	258	263	anti-parallel
Strand 4	Q	207	215	anti-parallel
Strand 5	Q	226	235	anti-parallel

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There are 5 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	R	168	174	first strand
Strand 2	R	146	151	anti-parallel
Strand 3	R	278	283	anti-parallel
Strand 4	R	191	201	anti-parallel
Strand 5	R	243	253	anti-parallel

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There are 5 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	R	158	159	first strand
Strand 2	R	164	165	anti-parallel
Strand 3	R	258	263	anti-parallel
Strand 4	R	185	187	anti-parallel
Strand 5	R	178	180	anti-parallel

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There are 5 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	R	158	159	first strand
Strand 2	R	164	165	anti-parallel
Strand 3	R	258	263	anti-parallel
Strand 4	R	207	215	anti-parallel
Strand 5	R	226	235	anti-parallel

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There are 2 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	S	23	26	first strand
Strand 2	S	31	34	anti-parallel

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There are 2 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	T	23	26	first strand
Strand 2	T	31	34	anti-parallel

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There are 2 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	U	23	26	first strand
Strand 2	U	31	34	anti-parallel

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There are 5 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	V	168	174	first strand
Strand 2	V	146	151	anti-parallel
Strand 3	V	278	283	anti-parallel
Strand 4	V	191	201	anti-parallel
Strand 5	V	243	253	anti-parallel

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There are 5 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	V	158	159	first strand
Strand 2	V	164	165	anti-parallel
Strand 3	V	258	263	anti-parallel
Strand 4	V	185	187	anti-parallel
Strand 5	V	178	180	anti-parallel

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There are 5 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	V	158	159	first strand
Strand 2	V	164	165	anti-parallel
Strand 3	V	258	263	anti-parallel
Strand 4	V	207	215	anti-parallel
Strand 5	V	226	235	anti-parallel

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There are 5 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	W	168	174	first strand
Strand 2	W	146	151	anti-parallel
Strand 3	W	278	283	anti-parallel
Strand 4	W	191	201	anti-parallel
Strand 5	W	243	253	anti-parallel

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There are 5 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	W	158	159	first strand
Strand 2	W	164	165	anti-parallel
Strand 3	W	258	263	anti-parallel
Strand 4	W	185	187	anti-parallel
Strand 5	W	178	180	anti-parallel

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There are 5 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	W	158	159	first strand
Strand 2	W	164	165	anti-parallel
Strand 3	W	258	263	anti-parallel
Strand 4	W	207	215	anti-parallel
Strand 5	W	226	235	anti-parallel

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There are 5 strands in AF1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	X	168	174	first strand
Strand 2	X	146	151	anti-parallel
Strand 3	X	278	283	anti-parallel
Strand 4	X	191	201	anti-parallel
Strand 5	X	243	253	anti-parallel

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There are 5 strands in AF2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	X	158	159	first strand
Strand 2	X	164	165	anti-parallel
Strand 3	X	258	263	anti-parallel
Strand 4	X	185	187	anti-parallel
Strand 5	X	178	180	anti-parallel

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There are 5 strands in AF3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	X	158	159	first strand
Strand 2	X	164	165	anti-parallel
Strand 3	X	258	263	anti-parallel
Strand 4	X	207	215	anti-parallel
Strand 5	X	226	235	anti-parallel

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There are 2 strands in AF4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Y	23	26	first strand
Strand 2	Y	31	34	anti-parallel

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There are 2 strands in AF5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Z	23	26	first strand
Strand 2	Z	31	34	anti-parallel

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There are 2 strands in AF6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	a	23	26	first strand
Strand 2	a	31	34	anti-parallel

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There are 5 strands in AF7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	b	168	174	first strand
Strand 2	b	146	151	anti-parallel
Strand 3	b	278	283	anti-parallel
Strand 4	b	191	201	anti-parallel
Strand 5	b	243	253	anti-parallel

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There are 5 strands in AF8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	b	158	159	first strand
Strand 2	b	164	165	anti-parallel
Strand 3	b	258	263	anti-parallel
Strand 4	b	185	187	anti-parallel
Strand 5	b	178	180	anti-parallel

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There are 5 strands in AF9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	b	158	159	first strand
Strand 2	b	164	165	anti-parallel
Strand 3	b	258	263	anti-parallel
Strand 4	b	207	215	anti-parallel
Strand 5	b	226	235	anti-parallel

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There are 5 strands in AG1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	c	168	174	first strand
Strand 2	c	146	151	anti-parallel
Strand 3	c	278	283	anti-parallel
Strand 4	c	191	201	anti-parallel
Strand 5	c	243	253	anti-parallel

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There are 5 strands in AG2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	c	158	159	first strand
Strand 2	c	164	165	anti-parallel
Strand 3	c	258	263	anti-parallel
Strand 4	c	185	187	anti-parallel
Strand 5	c	178	180	anti-parallel

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There are 5 strands in AG3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	c	158	159	first strand
Strand 2	c	164	165	anti-parallel
Strand 3	c	258	263	anti-parallel
Strand 4	c	207	215	anti-parallel
Strand 5	c	226	235	anti-parallel

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There are 5 strands in AG4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	d	168	174	first strand
Strand 2	d	146	151	anti-parallel
Strand 3	d	278	283	anti-parallel
Strand 4	d	191	201	anti-parallel
Strand 5	d	243	253	anti-parallel

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There are 5 strands in AG5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	d	158	159	first strand
Strand 2	d	164	165	anti-parallel
Strand 3	d	258	263	anti-parallel
Strand 4	d	185	187	anti-parallel
Strand 5	d	178	180	anti-parallel

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There are 5 strands in AG6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	d	158	159	first strand
Strand 2	d	164	165	anti-parallel
Strand 3	d	258	263	anti-parallel
Strand 4	d	207	215	anti-parallel
Strand 5	d	226	235	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8ZUJ

Analysis of interatomic Contacts of Structural Units in PDB entry:
8ZUJ