Analysis of interatomic Contacts of Structural Units in PDB entry:
8ZVL

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8ZVL entry

There are 4 chains in PDB entry 8ZVL (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 30	SER 463
D	SER 30	LYS 464
B	SER 30	SER 463
C	SER 30	LYS 464

There are 93 helices in PDB entry 8ZVL. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	32	56	Right-handed alpha
Helix 2	AA2	A	65	70	Right-handed alpha
Helix 3	AA3	A	98	105	Right-handed alpha
Helix 4	AA4	A	115	126	Right-handed alpha
Helix 5	AA5	A	130	144	Right-handed alpha
Helix 6	AA6	A	148	158	Right-handed alpha
Helix 7	AA7	A	163	175	Right-handed alpha
Helix 8	AA8	A	176	178	Right-handed 310
Helix 9	AA9	A	179	187	Right-handed alpha
Helix 10	AB1	A	190	192	Right-handed 310
Helix 11	AB2	A	193	222	Right-handed alpha
Helix 12	AB3	A	235	245	Right-handed alpha
Helix 13	AB4	A	248	262	Right-handed alpha
Helix 14	AB5	A	269	280	Right-handed alpha
Helix 15	AB6	A	284	297	Right-handed alpha
Helix 16	AB7	A	303	318	Right-handed alpha
Helix 17	AB8	A	324	338	Right-handed alpha
Helix 18	AB9	A	354	368	Right-handed alpha
Helix 19	AC1	A	371	392	Right-handed alpha
Helix 20	AC2	A	401	412	Right-handed alpha
Helix 21	AC3	A	416	418	Right-handed 310
Helix 22	AC4	A	419	442	Right-handed alpha
Helix 23	AC5	A	453	463	Right-handed alpha
Helix 24	AC6	D	32	56	Right-handed alpha
Helix 25	AC7	D	65	70	Right-handed alpha
Helix 26	AC8	D	98	105	Right-handed alpha
Helix 27	AC9	D	115	126	Right-handed alpha
Helix 28	AD1	D	130	144	Right-handed alpha
Helix 29	AD2	D	148	158	Right-handed alpha
Helix 30	AD3	D	163	175	Right-handed alpha
Helix 31	AD4	D	176	178	Right-handed 310
Helix 32	AD5	D	179	187	Right-handed alpha
Helix 33	AD6	D	190	192	Right-handed 310
Helix 34	AD7	D	193	222	Right-handed alpha
Helix 35	AD8	D	235	245	Right-handed alpha
Helix 36	AD9	D	248	262	Right-handed alpha
Helix 37	AE1	D	269	281	Right-handed alpha
Helix 38	AE2	D	284	297	Right-handed alpha
Helix 39	AE3	D	303	320	Right-handed alpha
Helix 40	AE4	D	324	338	Right-handed alpha
Helix 41	AE5	D	354	368	Right-handed alpha
Helix 42	AE6	D	371	391	Right-handed alpha
Helix 43	AE7	D	401	412	Right-handed alpha
Helix 44	AE8	D	416	418	Right-handed 310
Helix 45	AE9	D	419	442	Right-handed alpha
Helix 46	AF1	D	453	463	Right-handed alpha
Helix 47	AF2	B	32	56	Right-handed alpha
Helix 48	AF3	B	65	70	Right-handed alpha
Helix 49	AF4	B	98	105	Right-handed alpha
Helix 50	AF5	B	115	126	Right-handed alpha
Helix 51	AF6	B	130	144	Right-handed alpha
Helix 52	AF7	B	148	158	Right-handed alpha
Helix 53	AF8	B	163	175	Right-handed alpha
Helix 54	AF9	B	176	178	Right-handed 310
Helix 55	AG1	B	179	187	Right-handed alpha
Helix 56	AG2	B	190	192	Right-handed 310
Helix 57	AG3	B	193	222	Right-handed alpha
Helix 58	AG4	B	235	245	Right-handed alpha
Helix 59	AG5	B	248	262	Right-handed alpha
Helix 60	AG6	B	269	280	Right-handed alpha
Helix 61	AG7	B	284	297	Right-handed alpha
Helix 62	AG8	B	303	318	Right-handed alpha
Helix 63	AG9	B	324	338	Right-handed alpha
Helix 64	AH1	B	354	368	Right-handed alpha
Helix 65	AH2	B	371	392	Right-handed alpha
Helix 66	AH3	B	401	412	Right-handed alpha
Helix 67	AH4	B	416	418	Right-handed 310
Helix 68	AH5	B	419	442	Right-handed alpha
Helix 69	AH6	B	453	463	Right-handed alpha
Helix 70	AH7	C	32	56	Right-handed alpha
Helix 71	AH8	C	65	70	Right-handed alpha
Helix 72	AH9	C	98	105	Right-handed alpha
Helix 73	AI1	C	115	126	Right-handed alpha
Helix 74	AI2	C	130	144	Right-handed alpha
Helix 75	AI3	C	148	158	Right-handed alpha
Helix 76	AI4	C	163	175	Right-handed alpha
Helix 77	AI5	C	176	178	Right-handed 310
Helix 78	AI6	C	179	187	Right-handed alpha
Helix 79	AI7	C	190	192	Right-handed 310
Helix 80	AI8	C	193	222	Right-handed alpha
Helix 81	AI9	C	235	245	Right-handed alpha
Helix 82	AJ1	C	248	262	Right-handed alpha
Helix 83	AJ2	C	269	281	Right-handed alpha
Helix 84	AJ3	C	284	297	Right-handed alpha
Helix 85	AJ4	C	303	319	Right-handed alpha
Helix 86	AJ5	C	324	338	Right-handed alpha
Helix 87	AJ6	C	354	368	Right-handed alpha
Helix 88	AJ7	C	371	382	Right-handed alpha
Helix 89	AJ8	C	383	390	Right-handed alpha
Helix 90	AJ9	C	401	412	Right-handed alpha
Helix 91	AK1	C	416	418	Right-handed 310
Helix 92	AK2	C	419	442	Right-handed alpha
Helix 93	AK3	C	453	463	Right-handed alpha

There are 10 sheets in PDB entry 8ZVL. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	59	64	first strand
Strand 2	D	59	64	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	76	79	first strand
Strand 2	D	450	452	parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	83	86	first strand
Strand 2	A	90	93	anti-parallel
Strand 3	A	96	97	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	450	452	first strand
Strand 2	D	76	79	parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	83	86	first strand
Strand 2	D	90	93	anti-parallel
Strand 3	D	96	97	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	59	64	first strand
Strand 2	C	59	64	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	76	79	first strand
Strand 2	C	450	452	parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	83	86	first strand
Strand 2	B	90	93	anti-parallel
Strand 3	B	96	97	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	450	452	first strand
Strand 2	C	76	79	parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	83	86	first strand
Strand 2	C	90	93	anti-parallel
Strand 3	C	96	97	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8ZVL

Analysis of interatomic Contacts of Structural Units in PDB entry:
8ZVL