Analysis of interatomic Contacts of Structural Units in PDB entry:
8ZVT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8ZVT entry

There is 1 chain in PDB entry 8ZVT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 30SER 463
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 24 helices in PDB entry 8ZVT. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
32 56Right-handed alpha
Helix 2
AA2
A
64 70Right-handed alpha
Helix 3
AA3
A
97 105Right-handed alpha
Helix 4
AA4
A
115 126Right-handed alpha
Helix 5
AA5
A
130 144Right-handed alpha
Helix 6
AA6
A
148 158Right-handed alpha
Helix 7
AA7
A
163 175Right-handed alpha
Helix 8
AA8
A
176 178Right-handed 310
Helix 9
AA9
A
179 187Right-handed alpha
Helix 10
AB1
A
190 192Right-handed 310
Helix 11
AB2
A
193 222Right-handed alpha
Helix 12
AB3
A
235 245Right-handed alpha
Helix 13
AB4
A
248 262Right-handed alpha
Helix 14
AB5
A
269 281Right-handed alpha
Helix 15
AB6
A
284 297Right-handed alpha
Helix 16
AB7
A
298 303Right-handed alpha
Helix 17
AB8
A
303 320Right-handed alpha
Helix 18
AB9
A
324 338Right-handed alpha
Helix 19
AC1
A
354 368Right-handed alpha
Helix 20
AC2
A
371 390Right-handed alpha
Helix 21
AC3
A
401 412Right-handed alpha
Helix 22
AC4
A
416 418Right-handed 310
Helix 23
AC5
A
419 442Right-handed alpha
Helix 24
AC6
A
453 463Right-handed alpha
Back to top of page

There is 1 sheet (AA1) in PDB entry 8ZVT.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
83 86first strand
Strand 2
A
90 93anti-parallel
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il