Analysis of interatomic Contacts of Structural Units in PDB entry:
8ZWA


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8ZWA entry

There are 3 chains in PDB entry 8ZWA (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 374ASP 787
B
 ALA 2MET 617
C
 ARG 5ASN 527
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 66 helices in PDB entry 8ZWA. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
374 384Right-handed alpha
Helix 2
AA2
A
385 396Right-handed alpha
Helix 3
AA3
A
405 418Right-handed alpha
Helix 4
AA4
A
420 434Right-handed alpha
Helix 5
AA5
A
442 447Right-handed 310
Helix 6
AA6
A
460 471Right-handed alpha
Helix 7
AA7
A
471 476Right-handed alpha
Helix 8
AA8
A
484 488Right-handed 310
Helix 9
AA9
A
495 499Right-handed 310
Helix 10
AB1
A
544 549Right-handed alpha
Helix 11
AB2
A
570 575Right-handed alpha
Helix 12
AB3
A
622 627Right-handed alpha
Helix 13
AB4
A
644 650Right-handed alpha
Helix 14
AB5
A
692 698Right-handed 310
Helix 15
AB6
A
739 745Right-handed alpha
Helix 16
AB7
A
757 768Right-handed alpha
Helix 17
AB8
A
782 786Right-handed 310
Helix 18
AB9
B
3 8Right-handed alpha
Helix 19
AC1
B
10 26Right-handed alpha
Helix 20
AC2
B
48 53Right-handed alpha
Helix 21
AC3
B
86 98Right-handed alpha
Helix 22
AC4
B
102 113Right-handed alpha
Helix 23
AC5
B
123 141Right-handed alpha
Helix 24
AC6
B
163 173Right-handed alpha
Helix 25
AC7
B
175 177Right-handed 310
Helix 26
AC8
B
196 202Right-handed alpha
Helix 27
AC9
B
203 212Right-handed alpha
Helix 28
AD1
B
221 248Right-handed alpha
Helix 29
AD2
B
251 262Right-handed alpha
Helix 30
AD3
B
286 298Right-handed alpha
Helix 31
AD4
B
308 317Right-handed alpha
Helix 32
AD5
B
319 326Right-handed alpha
Helix 33
AD6
B
341 349Right-handed alpha
Helix 34
AD7
B
351 381Right-handed alpha
Helix 35
AD8
B
381 394Right-handed alpha
Helix 36
AD9
B
394 402Right-handed alpha
Helix 37
AE1
B
405 412Right-handed alpha
Helix 38
AE2
B
415 441Right-handed alpha
Helix 39
AE3
B
451 476Right-handed alpha
Helix 40
AE4
B
477 481Right-handed 310
Helix 41
AE5
B
491 507Right-handed alpha
Helix 42
AE6
B
547 556Right-handed alpha
Helix 43
AE7
B
560 581Right-handed alpha
Helix 44
AE8
B
584 589Right-handed alpha
Helix 45
AE9
B
593 602Right-handed alpha
Helix 46
AF1
B
603 610Right-handed alpha
Helix 47
AF2
B
612 617Right-handed alpha
Helix 48
AF3
C
8 19Right-handed alpha
Helix 49
AF4
C
19 36Right-handed alpha
Helix 50
AF5
C
86 96Right-handed alpha
Helix 51
AF6
C
97 106Right-handed alpha
Helix 52
AF7
C
118 133Right-handed alpha
Helix 53
AF8
C
154 164Right-handed alpha
Helix 54
AF9
C
207 221Right-handed alpha
Helix 55
AG1
C
227 241Right-handed alpha
Helix 56
AG2
C
257 270Right-handed alpha
Helix 57
AG3
C
276 290Right-handed alpha
Helix 58
AG4
C
295 327Right-handed alpha
Helix 59
AG5
C
332 339Right-handed alpha
Helix 60
AG6
C
342 369Right-handed alpha
Helix 61
AG7
C
372 378Right-handed 310
Helix 62
AG8
C
379 404Right-handed alpha
Helix 63
AG9
C
418 430Right-handed alpha
Helix 64
AH1
C
450 468Right-handed alpha
Helix 65
AH2
C
471 495Right-handed alpha
Helix 66
AH3
C
507 524Right-handed alpha
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There are 7 sheets in PDB entry 8ZWA. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
438 439first strand
Strand 2
A
457 458anti-parallel
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There are 11 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
509 511first strand
Strand 2
A
532 535parallel
Strand 3
A
554 559parallel
Strand 4
A
581 585parallel
Strand 5
A
604 608parallel
Strand 6
A
632 636parallel
Strand 7
A
655 659parallel
Strand 8
A
679 682parallel
Strand 9
A
703 706parallel
Strand 10
A
727 729parallel
Strand 11
A
749 752parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
540 541first strand
Strand 2
A
567 568parallel
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There are 8 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
31 35first strand
Strand 2
B
38 42anti-parallel
Strand 3
B
116 122parallel
Strand 4
B
152 156parallel
Strand 5
B
179 184parallel
Strand 6
B
272 276parallel
Strand 7
B
280 283anti-parallel
Strand 8
B
331 334parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
64 65first strand
Strand 2
B
84 85anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
39 43first strand
Strand 2
C
46 50anti-parallel
Strand 3
C
111 115parallel
Strand 4
C
141 144parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
171 175first strand
Strand 2
C
193 197parallel
Strand 3
C
202 205anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il