Analysis of interatomic Contacts of Structural Units in PDB entry:
8ZWE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8ZWE entry

There are 2 chains in PDB entry 8ZWE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 389MET 589
B
 THR 20PRO 612
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 35 helices in PDB entry 8ZWE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
393 398Right-handed alpha
Helix 2
AA2
A
418 425Right-handed alpha
Helix 3
AA3
A
437 443Right-handed alpha
Helix 4
AA4
A
461 465Right-handed 310
Helix 5
AA5
A
470 476Right-handed alpha
Helix 6
AA6
A
532 537Right-handed alpha
Helix 7
AA7
B
21 53Right-handed alpha
Helix 8
AA8
B
55 81Right-handed alpha
Helix 9
AA9
B
90 102Right-handed alpha
Helix 10
AB1
B
109 129Right-handed alpha
Helix 11
AB2
B
147 154Right-handed alpha
Helix 12
AB3
B
157 172Right-handed alpha
Helix 13
AB4
B
176 193Right-handed alpha
Helix 14
AB5
B
198 205Right-handed alpha
Helix 15
AB6
B
206 208Right-handed 310
Helix 16
AB7
B
218 249Right-handed alpha
Helix 17
AB8
B
265 267Right-handed 310
Helix 18
AB9
B
275 282Right-handed 310
Helix 19
AC1
B
293 300Right-handed alpha
Helix 20
AC2
B
303 317Right-handed alpha
Helix 21
AC3
B
324 331Right-handed alpha
Helix 22
AC4
B
365 385Right-handed alpha
Helix 23
AC5
B
399 413Right-handed alpha
Helix 24
AC6
B
414 422Right-handed alpha
Helix 25
AC7
B
433 443Right-handed alpha
Helix 26
AC8
B
449 466Right-handed alpha
Helix 27
AC9
B
472 484Right-handed alpha
Helix 28
AD1
B
499 502Right-handed 310
Helix 29
AD2
B
503 508Right-handed alpha
Helix 30
AD3
B
513 533Right-handed alpha
Helix 31
AD4
B
538 542Right-handed 310
Helix 32
AD5
B
547 559Right-handed alpha
Helix 33
AD6
B
565 575Right-handed alpha
Helix 34
AD7
B
581 588Right-handed alpha
Helix 35
AD8
B
588 599Right-handed alpha
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There are 6 sheets in PDB entry 8ZWE. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
408 412first strand
Strand 2
A
448 455anti-parallel
Strand 3
A
570 578anti-parallel
Strand 4
A
485 491anti-parallel
Strand 5
A
431 434anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
415 417first strand
Strand 2
A
586 588parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
518 521first strand
Strand 2
A
504 515anti-parallel
Strand 3
A
554 564anti-parallel
Strand 4
A
545 551anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
131 132first strand
Strand 2
B
142 143anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
262 263first strand
Strand 2
B
487 488parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
347 350first strand
Strand 2
B
356 359anti-parallel
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