Analysis of interatomic Contacts of Structural Units in PDB entry:
8ZWO

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8ZWO entry

There are 8 chains in PDB entry 8ZWO (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASN 165	ALA 856
B	TYR 34	MET 349
C	ASN 19	ALA 338
D	VAL 38	GLN 361
E	MET 1	ASP 349
F	MET 1	ILE 255
G	MET 1	ASP 257
H	MET 1	GLU 256

There are115 helices in PDB entry 8ZWO. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	282	286	Right-handed alpha
Helix 2	AA2	A	290	294	Right-handed 310
Helix 3	AA3	A	379	392	Right-handed alpha
Helix 4	AA4	A	405	418	Right-handed alpha
Helix 5	AA5	A	424	428	Right-handed 310
Helix 6	AA6	A	471	479	Right-handed alpha
Helix 7	AA7	A	498	503	Right-handed alpha
Helix 8	AA8	A	517	530	Right-handed alpha
Helix 9	AA9	A	534	544	Right-handed alpha
Helix 10	AB1	A	548	556	Right-handed alpha
Helix 11	AB2	A	585	595	Right-handed alpha
Helix 12	AB3	A	633	641	Right-handed alpha
Helix 13	AB4	A	645	656	Right-handed alpha
Helix 14	AB5	A	665	689	Right-handed alpha
Helix 15	AB6	A	691	696	Right-handed 310
Helix 16	AB7	A	697	698	Right-handed 310
Helix 17	AB8	A	699	709	Right-handed alpha
Helix 18	AB9	A	721	745	Right-handed alpha
Helix 19	AC1	A	753	760	Right-handed alpha
Helix 20	AC2	A	761	770	Right-handed alpha
Helix 21	AC3	A	788	799	Right-handed alpha
Helix 22	AC4	A	821	826	Right-handed alpha
Helix 23	AC5	A	837	856	Right-handed alpha
Helix 24	AC6	B	37	42	Right-handed alpha
Helix 25	AC7	B	46	50	Right-handed 310
Helix 26	AC8	B	53	67	Right-handed alpha
Helix 27	AC9	B	81	95	Right-handed alpha
Helix 28	AD1	B	97	101	Right-handed alpha
Helix 29	AD2	B	112	117	Right-handed alpha
Helix 30	AD3	B	118	126	Right-handed alpha
Helix 31	AD4	B	142	146	Right-handed 310
Helix 32	AD5	B	147	161	Right-handed alpha
Helix 33	AD6	B	173	177	Right-handed 310
Helix 34	AD7	B	178	184	Right-handed alpha
Helix 35	AD8	B	194	210	Right-handed alpha
Helix 36	AD9	B	214	226	Right-handed alpha
Helix 37	AE1	B	228	244	Right-handed alpha
Helix 38	AE2	B	247	255	Right-handed alpha
Helix 39	AE3	B	259	272	Right-handed alpha
Helix 40	AE4	B	274	288	Right-handed alpha
Helix 41	AE5	B	291	305	Right-handed alpha
Helix 42	AE6	B	309	330	Right-handed alpha
Helix 43	AE7	B	333	348	Right-handed alpha
Helix 44	AE8	C	21	26	Right-handed alpha
Helix 45	AE9	C	30	34	Right-handed 310
Helix 46	AF1	C	37	50	Right-handed alpha
Helix 47	AF2	C	65	78	Right-handed alpha
Helix 48	AF3	C	79	86	Right-handed alpha
Helix 49	AF4	C	99	103	Right-handed alpha
Helix 50	AF5	C	103	111	Right-handed alpha
Helix 51	AF6	C	126	130	Right-handed 310
Helix 52	AF7	C	131	145	Right-handed alpha
Helix 53	AF8	C	157	161	Right-handed 310
Helix 54	AF9	C	178	193	Right-handed alpha
Helix 55	AG1	C	198	210	Right-handed alpha
Helix 56	AG2	C	212	227	Right-handed alpha
Helix 57	AG3	C	231	240	Right-handed alpha
Helix 58	AG4	C	243	257	Right-handed alpha
Helix 59	AG5	C	258	274	Right-handed alpha
Helix 60	AG6	C	276	291	Right-handed alpha
Helix 61	AG7	C	294	313	Right-handed alpha
Helix 62	AG8	C	317	338	Right-handed alpha
Helix 63	AG9	D	39	44	Right-handed alpha
Helix 64	AH1	D	55	64	Right-handed alpha
Helix 65	AH2	D	83	96	Right-handed alpha
Helix 66	AH3	D	116	128	Right-handed alpha
Helix 67	AH4	D	151	155	Right-handed 310
Helix 68	AH5	D	156	168	Right-handed alpha
Helix 69	AH6	D	181	185	Right-handed 310
Helix 70	AH7	D	186	191	Right-handed alpha
Helix 71	AH8	D	203	218	Right-handed alpha
Helix 72	AH9	D	223	234	Right-handed alpha
Helix 73	AI1	D	240	252	Right-handed alpha
Helix 74	AI2	D	258	267	Right-handed alpha
Helix 75	AI3	D	270	284	Right-handed alpha
Helix 76	AI4	D	285	299	Right-handed alpha
Helix 77	AI5	D	302	315	Right-handed alpha
Helix 78	AI6	D	320	340	Right-handed alpha
Helix 79	AI7	D	343	360	Right-handed alpha
Helix 80	AI8	E	3	8	Right-handed alpha
Helix 81	AI9	E	12	16	Right-handed 310
Helix 82	AJ1	E	19	32	Right-handed alpha
Helix 83	AJ2	E	47	60	Right-handed alpha
Helix 84	AJ3	E	61	66	Right-handed 310
Helix 85	AJ4	E	96	102	Right-handed 310
Helix 86	AJ5	E	103	119	Right-handed alpha
Helix 87	AJ6	E	137	140	Right-handed 310
Helix 88	AJ7	E	141	155	Right-handed alpha
Helix 89	AJ8	E	172	179	Right-handed alpha
Helix 90	AJ9	E	188	203	Right-handed alpha
Helix 91	AK1	E	208	219	Right-handed alpha
Helix 92	AK2	E	222	237	Right-handed alpha
Helix 93	AK3	E	249	265	Right-handed alpha
Helix 94	AK4	E	267	284	Right-handed alpha
Helix 95	AK5	E	287	302	Right-handed alpha
Helix 96	AK6	E	304	325	Right-handed alpha
Helix 97	AK7	E	327	349	Right-handed alpha
Helix 98	AK8	F	9	21	Right-handed alpha
Helix 99	AK9	F	55	57	Right-handed 310
Helix 100	AL1	F	72	80	Right-handed alpha
Helix 101	AL2	F	141	153	Right-handed alpha
Helix 102	AL3	F	209	216	Right-handed alpha
Helix 103	AL4	F	217	222	Right-handed 310
Helix 104	AL5	G	9	21	Right-handed alpha
Helix 105	AL6	G	55	57	Right-handed 310
Helix 106	AL7	G	72	80	Right-handed alpha
Helix 107	AL8	G	141	155	Right-handed alpha
Helix 108	AL9	G	190	194	Right-handed 310
Helix 109	AM1	G	209	216	Right-handed alpha
Helix 110	AM2	G	217	219	Right-handed 310
Helix 111	AM3	H	9	21	Right-handed alpha
Helix 112	AM4	H	72	80	Right-handed alpha
Helix 113	AM5	H	141	155	Right-handed alpha
Helix 114	AM6	H	209	217	Right-handed alpha
Helix 115	AM7	H	218	222	Right-handed 310

There are 14 sheets in PDB entry 8ZWO. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	177	180	first strand
Strand 2	A	188	191	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	394	395	first strand
Strand 2	A	430	434	parallel
Strand 3	A	486	488	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	803	807	first strand
Strand 2	A	813	817	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	72	75	first strand
Strand 2	B	186	189	parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	102	105	first strand
Strand 2	B	136	140	parallel
Strand 3	B	165	169	parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	87	91	first strand
Strand 2	C	120	125	parallel
Strand 3	C	149	155	parallel
Strand 4	C	56	59	parallel
Strand 5	C	170	173	parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	145	147	first strand
Strand 2	D	174	180	parallel
Strand 3	D	74	77	parallel
Strand 4	D	195	198	parallel

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There are 7 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	68	74	first strand
Strand 2	E	82	88	anti-parallel
Strand 3	E	92	95	anti-parallel
Strand 4	E	130	135	parallel
Strand 5	E	159	165	parallel
Strand 6	E	38	41	parallel
Strand 7	E	180	183	parallel

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There are 9 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	59	61	first strand
Strand 2	F	3	6	anti-parallel
Strand 3	F	87	91	anti-parallel
Strand 4	F	98	104	anti-parallel
Strand 5	F	110	117	anti-parallel
Strand 6	G	176	183	anti-parallel
Strand 7	G	166	172	anti-parallel
Strand 8	G	157	162	anti-parallel
Strand 9	G	203	208	anti-parallel

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There are 9 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	66	71	first strand
Strand 2	F	25	31	anti-parallel
Strand 3	F	34	40	anti-parallel
Strand 4	F	46	53	anti-parallel
Strand 5	F	245	251	anti-parallel
Strand 6	F	235	241	anti-parallel
Strand 7	F	224	229	anti-parallel
Strand 8	F	135	140	anti-parallel
Strand 9	F	196	199	anti-parallel

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There are 9 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	203	208	first strand
Strand 2	F	157	162	anti-parallel
Strand 3	F	166	172	anti-parallel
Strand 4	F	176	183	anti-parallel
Strand 5	H	111	117	anti-parallel
Strand 6	H	98	104	anti-parallel
Strand 7	H	87	92	anti-parallel
Strand 8	H	2	6	anti-parallel
Strand 9	H	59	61	anti-parallel

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There are 9 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	59	61	first strand
Strand 2	G	2	6	anti-parallel
Strand 3	G	87	92	anti-parallel
Strand 4	G	98	104	anti-parallel
Strand 5	G	111	117	anti-parallel
Strand 6	H	176	183	anti-parallel
Strand 7	H	166	173	anti-parallel
Strand 8	H	157	162	anti-parallel
Strand 9	H	204	208	anti-parallel

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There are 9 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	66	71	first strand
Strand 2	G	25	30	anti-parallel
Strand 3	G	34	40	anti-parallel
Strand 4	G	46	53	anti-parallel
Strand 5	G	245	251	anti-parallel
Strand 6	G	235	240	anti-parallel
Strand 7	G	224	229	anti-parallel
Strand 8	G	135	140	anti-parallel
Strand 9	G	196	199	anti-parallel

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There are 9 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	69	71	first strand
Strand 2	H	25	30	anti-parallel
Strand 3	H	34	40	anti-parallel
Strand 4	H	46	53	anti-parallel
Strand 5	H	245	251	anti-parallel
Strand 6	H	233	241	anti-parallel
Strand 7	H	224	230	anti-parallel
Strand 8	H	135	140	anti-parallel
Strand 9	H	196	199	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8ZWO

Analysis of interatomic Contacts of Structural Units in PDB entry:
8ZWO