Analysis of interatomic Contacts of Structural Units in PDB entry:
8ZXG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8ZXG entry

There is 1 chain in PDB entry 8ZXG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LYS 309
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 13 helices in PDB entry 8ZXG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
37 51Right-handed alpha
Helix 2
AA2
A
54 58Right-handed 310
Helix 3
AA3
A
67 72Right-handed alpha
Helix 4
AA4
A
73 77Right-handed 310
Helix 5
AA5
A
88 95Right-handed alpha
Helix 6
AA6
A
96 114Right-handed alpha
Helix 7
AA7
A
117 121Right-handed 310
Helix 8
AA8
A
206 221Right-handed alpha
Helix 9
AA9
A
236 262Right-handed alpha
Helix 10
AB1
A
265 274Right-handed alpha
Helix 11
AB2
A
276 281Right-handed alpha
Helix 12
AB3
A
285 294Right-handed alpha
Helix 13
AB4
A
295 297Right-handed 310
Back to top of page

There are 2 sheets in PDB entry 8ZXG. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3 10first strand
Strand 2
A
17 24anti-parallel
Strand 3
A
28 31anti-parallel
Strand 4
A
60 62parallel
Strand 5
A
82 85parallel
Strand 6
A
141 142parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
155 159first strand
Strand 2
A
168 172anti-parallel
Strand 3
A
177 181anti-parallel
Strand 4
A
225 228parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il