Analysis of interatomic Contacts of Structural Units in PDB entry:
8ZXS

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8ZXS entry

There are 2 chains in PDB entry 8ZXS (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	ARG 1040
B	MET 1	GLU 272

There are123 helices in PDB entry 8ZXS. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	4	10	Right-handed alpha
Helix 2	AA2	A	10	32	Right-handed alpha
Helix 3	AA3	A	55	63	Right-handed alpha
Helix 4	AA4	A	63	72	Right-handed alpha
Helix 5	AA5	A	101	117	Right-handed alpha
Helix 6	AA6	A	118	120	Right-handed 310
Helix 7	AA7	A	121	127	Right-handed alpha
Helix 8	AA8	A	152	164	Right-handed alpha
Helix 9	AA9	A	164	170	Right-handed alpha
Helix 10	AB1	A	192	199	Right-handed alpha
Helix 11	AB2	A	202	214	Right-handed alpha
Helix 12	AB3	A	245	251	Right-handed alpha
Helix 13	AB4	A	301	317	Right-handed alpha
Helix 14	AB5	A	318	320	Right-handed 310
Helix 15	AB6	A	333	362	Right-handed alpha
Helix 16	AB7	A	364	389	Right-handed alpha
Helix 17	AB8	A	394	426	Right-handed alpha
Helix 18	AB9	A	428	456	Right-handed alpha
Helix 19	AC1	A	457	461	Right-handed 310
Helix 20	AC2	A	462	499	Right-handed alpha
Helix 21	AC3	A	507	518	Right-handed alpha
Helix 22	AC4	A	520	543	Right-handed alpha
Helix 23	AC5	A	545	567	Right-handed alpha
Helix 24	AC6	A	591	609	Right-handed alpha
Helix 25	AC7	A	641	645	Right-handed 310
Helix 26	AC8	A	648	661	Right-handed alpha
Helix 27	AC9	A	695	714	Right-handed alpha
Helix 28	AD1	A	736	743	Right-handed alpha
Helix 29	AD2	A	746	759	Right-handed alpha
Helix 30	AD3	A	781	784	Right-handed 310
Helix 31	AD4	A	786	793	Right-handed alpha
Helix 32	AD5	A	841	857	Right-handed alpha
Helix 33	AD6	A	866	875	Right-handed alpha
Helix 34	AD7	A	878	899	Right-handed alpha
Helix 35	AD8	A	903	909	Right-handed alpha
Helix 36	AD9	A	910	926	Right-handed alpha
Helix 37	AE1	A	930	961	Right-handed alpha
Helix 38	AE2	A	964	992	Right-handed alpha
Helix 39	AE3	A	993	995	Right-handed 310
Helix 40	AE4	A	1001	1037	Right-handed alpha
Helix 41	AE5	B	4	10	Right-handed alpha
Helix 42	AE6	B	10	29	Right-handed alpha
Helix 43	AE7	B	30	32	Right-handed 310
Helix 44	AE8	B	55	63	Right-handed alpha
Helix 45	AE9	B	63	72	Right-handed alpha
Helix 46	AF1	B	101	117	Right-handed alpha
Helix 47	AF2	B	118	120	Right-handed 310
Helix 48	AF3	B	121	128	Right-handed alpha
Helix 49	AF4	B	152	164	Right-handed alpha
Helix 50	AF5	B	164	170	Right-handed alpha
Helix 51	AF6	B	192	199	Right-handed alpha
Helix 52	AF7	B	202	214	Right-handed alpha
Helix 53	AF8	B	245	251	Right-handed alpha
Helix 54	AF9	B	301	318	Right-handed alpha
Helix 55	AG1	B	332	362	Right-handed alpha
Helix 56	AG2	B	368	389	Right-handed alpha
Helix 57	AG3	B	394	425	Right-handed alpha
Helix 58	AG4	B	428	438	Right-handed alpha
Helix 59	AG5	B	440	456	Right-handed alpha
Helix 60	AG6	B	457	460	Right-handed 310
Helix 61	AG7	B	462	499	Right-handed alpha
Helix 62	AG8	B	506	517	Right-handed alpha
Helix 63	AG9	B	520	543	Right-handed alpha
Helix 64	AH1	B	545	564	Right-handed alpha
Helix 65	AH2	B	591	608	Right-handed alpha
Helix 66	AH3	B	641	645	Right-handed 310
Helix 67	AH4	B	648	661	Right-handed alpha
Helix 68	AH5	B	696	714	Right-handed alpha
Helix 69	AH6	B	736	744	Right-handed alpha
Helix 70	AH7	B	746	760	Right-handed alpha
Helix 71	AH8	B	781	784	Right-handed 310
Helix 72	AH9	B	786	793	Right-handed alpha
Helix 73	AI1	B	841	856	Right-handed alpha
Helix 74	AI2	B	867	875	Right-handed alpha
Helix 75	AI3	B	878	899	Right-handed alpha
Helix 76	AI4	B	904	909	Right-handed alpha
Helix 77	AI5	B	910	926	Right-handed alpha
Helix 78	AI6	B	930	960	Right-handed alpha
Helix 79	AI7	B	964	991	Right-handed alpha
Helix 80	AI8	B	992	996	Right-handed 310
Helix 81	AI9	B	1001	1025	Right-handed alpha
Helix 82	AJ1	B	1026	1034	Right-handed alpha
Helix 83	AJ2	B	1034	1039	Right-handed alpha
Helix 84	AJ3	C	2	9	Right-handed alpha
Helix 85	AJ4	C	10	29	Right-handed alpha
Helix 86	AJ5	C	30	32	Right-handed 310
Helix 87	AJ6	C	55	63	Right-handed alpha
Helix 88	AJ7	C	63	72	Right-handed alpha
Helix 89	AJ8	C	101	117	Right-handed alpha
Helix 90	AJ9	C	118	120	Right-handed 310
Helix 91	AK1	C	121	128	Right-handed alpha
Helix 92	AK2	C	152	164	Right-handed alpha
Helix 93	AK3	C	164	171	Right-handed alpha
Helix 94	AK4	C	192	199	Right-handed alpha
Helix 95	AK5	C	202	214	Right-handed alpha
Helix 96	AK6	C	245	251	Right-handed alpha
Helix 97	AK7	C	265	268	Right-handed alpha
Helix 98	AK8	C	302	318	Right-handed alpha
Helix 99	AK9	C	331	363	Right-handed alpha
Helix 100	AL1	C	364	381	Right-handed alpha
Helix 101	AL2	C	381	389	Right-handed alpha
Helix 102	AL3	C	396	405	Right-handed alpha
Helix 103	AL4	C	409	425	Right-handed alpha
Helix 104	AL5	C	428	456	Right-handed alpha
Helix 105	AL6	C	457	461	Right-handed 310
Helix 106	AL7	C	462	499	Right-handed alpha
Helix 107	AL8	C	507	545	Right-handed alpha
Helix 108	AL9	C	545	567	Right-handed alpha
Helix 109	AM1	C	591	608	Right-handed alpha
Helix 110	AM2	C	641	645	Right-handed 310
Helix 111	AM3	C	648	661	Right-handed alpha
Helix 112	AM4	C	695	714	Right-handed alpha
Helix 113	AM5	C	736	743	Right-handed alpha
Helix 114	AM6	C	746	760	Right-handed alpha
Helix 115	AM7	C	781	784	Right-handed 310
Helix 116	AM8	C	786	792	Right-handed alpha
Helix 117	AM9	C	841	857	Right-handed alpha
Helix 118	AN1	C	867	899	Right-handed alpha
Helix 119	AN2	C	902	909	Right-handed alpha
Helix 120	AN3	C	910	926	Right-handed alpha
Helix 121	AN4	C	930	962	Right-handed alpha
Helix 122	AN5	C	964	996	Right-handed alpha
Helix 123	AN6	C	1001	1036	Right-handed alpha

There are 21 sheets in PDB entry 8ZXS. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	130	133	first strand
Strand 2	A	44	50	anti-parallel
Strand 3	A	89	96	anti-parallel
Strand 4	A	77	84	anti-parallel
Strand 5	A	820	823	anti-parallel
Strand 6	A	826	833	anti-parallel
Strand 7	A	685	691	anti-parallel
Strand 8	A	861	865	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	174	180	first strand
Strand 2	A	287	296	anti-parallel
Strand 3	A	138	146	anti-parallel
Strand 4	A	325	330	anti-parallel

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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	174	180	first strand
Strand 2	A	287	296	anti-parallel
Strand 3	A	283	284	anti-parallel
Strand 4	A	612	621	anti-parallel
Strand 5	A	628	639	anti-parallel
Strand 6	A	579	585	anti-parallel
Strand 7	A	667	671	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	269	275	first strand
Strand 2	A	185	191	anti-parallel
Strand 3	A	771	779	parallel
Strand 4	A	761	768	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	221	222	first strand
Strand 2	A	235	238	anti-parallel
Strand 3	B	728	735	parallel
Strand 4	B	809	816	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	253	256	first strand
Strand 2	A	262	264	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	809	816	first strand
Strand 2	A	728	735	anti-parallel
Strand 3	C	235	241	parallel
Strand 4	C	215	222	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	794	796	first strand
Strand 2	A	802	804	anti-parallel

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There are 8 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	130	134	first strand
Strand 2	B	44	50	anti-parallel
Strand 3	B	89	96	anti-parallel
Strand 4	B	77	84	anti-parallel
Strand 5	B	820	823	anti-parallel
Strand 6	B	826	834	anti-parallel
Strand 7	B	684	691	anti-parallel
Strand 8	B	861	865	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	174	180	first strand
Strand 2	B	287	296	anti-parallel
Strand 3	B	138	145	anti-parallel
Strand 4	B	325	330	anti-parallel

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There are 7 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	174	180	first strand
Strand 2	B	287	296	anti-parallel
Strand 3	B	283	284	anti-parallel
Strand 4	B	612	622	anti-parallel
Strand 5	B	627	639	anti-parallel
Strand 6	B	579	585	anti-parallel
Strand 7	B	667	671	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	269	275	first strand
Strand 2	B	185	191	anti-parallel
Strand 3	B	771	779	parallel
Strand 4	B	761	768	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	221	222	first strand
Strand 2	B	235	240	anti-parallel
Strand 3	C	728	735	parallel
Strand 4	C	809	816	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	253	256	first strand
Strand 2	B	262	264	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	794	796	first strand
Strand 2	B	802	804	anti-parallel

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There are 8 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	130	133	first strand
Strand 2	C	44	50	anti-parallel
Strand 3	C	89	96	anti-parallel
Strand 4	C	77	84	anti-parallel
Strand 5	C	820	823	anti-parallel
Strand 6	C	826	833	anti-parallel
Strand 7	C	685	691	anti-parallel
Strand 8	C	861	865	anti-parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	174	179	first strand
Strand 2	C	287	296	anti-parallel
Strand 3	C	138	145	anti-parallel
Strand 4	C	325	327	anti-parallel

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There are 7 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	174	179	first strand
Strand 2	C	287	296	anti-parallel
Strand 3	C	283	284	anti-parallel
Strand 4	C	612	621	anti-parallel
Strand 5	C	628	639	anti-parallel
Strand 6	C	579	585	anti-parallel
Strand 7	C	667	671	anti-parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	269	275	first strand
Strand 2	C	185	191	anti-parallel
Strand 3	C	771	779	parallel
Strand 4	C	761	768	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	253	256	first strand
Strand 2	C	262	264	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	794	796	first strand
Strand 2	C	802	804	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8ZXS

Analysis of interatomic Contacts of Structural Units in PDB entry:
8ZXS