Analysis of interatomic Contacts of Structural Units in PDB entry:
8ZY7

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8ZY7 entry

There are 3 chains in PDB entry 8ZY7 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LEU 30	ASP 1114
B	LEU 30	ASP 1114
C	LEU 30	ASP 1114

There are 66 helices in PDB entry 8ZY7. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	146	150	Right-handed 310
Helix 2	AA2	A	285	295	Right-handed alpha
Helix 3	AA3	A	328	333	Right-handed alpha
Helix 4	AA4	A	340	344	Right-handed 310
Helix 5	AA5	A	356	360	Right-handed 310
Helix 6	AA6	A	396	401	Right-handed 310
Helix 7	AA7	A	474	477	Right-handed 310
Helix 8	AA8	A	591	596	Right-handed alpha
Helix 9	AA9	A	605	609	Right-handed 310
Helix 10	AB1	A	705	711	Right-handed alpha
Helix 11	AB2	A	714	722	Right-handed alpha
Helix 12	AB3	A	725	750	Right-handed alpha
Helix 13	AB4	A	784	791	Right-handed alpha
Helix 14	AB5	A	805	810	Right-handed alpha
Helix 15	AB6	A	818	824	Right-handed alpha
Helix 16	AB7	A	834	852	Right-handed alpha
Helix 17	AB8	A	865	876	Right-handed alpha
Helix 18	AB9	A	881	887	Right-handed alpha
Helix 19	AC1	A	887	909	Right-handed alpha
Helix 20	AC2	A	913	933	Right-handed alpha
Helix 21	AC3	A	945	950	Right-handed alpha
Helix 22	AC4	A	953	1001	Right-handed alpha
Helix 23	AC5	B	285	295	Right-handed alpha
Helix 24	AC6	B	329	334	Right-handed alpha
Helix 25	AC7	B	340	344	Right-handed 310
Helix 26	AC8	B	355	360	Right-handed 310
Helix 27	AC9	B	396	401	Right-handed 310
Helix 28	AD1	B	474	477	Right-handed 310
Helix 29	AD2	B	591	596	Right-handed alpha
Helix 30	AD3	B	714	719	Right-handed alpha
Helix 31	AD4	B	720	724	Right-handed 310
Helix 32	AD5	B	725	750	Right-handed alpha
Helix 33	AD6	B	784	791	Right-handed alpha
Helix 34	AD7	B	811	815	Right-handed 310
Helix 35	AD8	B	816	824	Right-handed alpha
Helix 36	AD9	B	834	852	Right-handed alpha
Helix 37	AE1	B	865	876	Right-handed alpha
Helix 38	AE2	B	881	887	Right-handed alpha
Helix 39	AE3	B	887	909	Right-handed alpha
Helix 40	AE4	B	913	933	Right-handed alpha
Helix 41	AE5	B	934	936	Right-handed 310
Helix 42	AE6	B	945	950	Right-handed alpha
Helix 43	AE7	B	957	1001	Right-handed alpha
Helix 44	AE8	C	285	295	Right-handed alpha
Helix 45	AE9	C	328	334	Right-handed alpha
Helix 46	AF1	C	340	344	Right-handed 310
Helix 47	AF2	C	355	360	Right-handed 310
Helix 48	AF3	C	377	380	Right-handed 310
Helix 49	AF4	C	396	401	Right-handed 310
Helix 50	AF5	C	474	477	Right-handed 310
Helix 51	AF6	C	591	597	Right-handed alpha
Helix 52	AF7	C	605	609	Right-handed 310
Helix 53	AF8	C	714	722	Right-handed alpha
Helix 54	AF9	C	723	727	Right-handed 310
Helix 55	AG1	C	728	750	Right-handed alpha
Helix 56	AG2	C	784	791	Right-handed alpha
Helix 57	AG3	C	805	811	Right-handed alpha
Helix 58	AG4	C	818	824	Right-handed alpha
Helix 59	AG5	C	834	852	Right-handed alpha
Helix 60	AG6	C	865	875	Right-handed alpha
Helix 61	AG7	C	881	886	Right-handed alpha
Helix 62	AG8	C	887	909	Right-handed alpha
Helix 63	AG9	C	913	933	Right-handed alpha
Helix 64	AH1	C	934	936	Right-handed 310
Helix 65	AH2	C	945	950	Right-handed alpha
Helix 66	AH3	C	957	1001	Right-handed alpha

There are 49 sheets in PDB entry 8ZY7. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1, AF2, AF3, AF4,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	32	35	first strand
Strand 2	A	64	70	anti-parallel
Strand 3	A	255	260	anti-parallel
Strand 4	A	93	98	anti-parallel
Strand 5	A	185	194	anti-parallel
Strand 6	A	197	206	anti-parallel
Strand 7	A	221	227	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	54	59	first strand
Strand 2	A	262	270	anti-parallel
Strand 3	A	276	281	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	104	108	first strand
Strand 2	A	236	239	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	122	124	first strand
Strand 2	A	129	135	anti-parallel
Strand 3	A	161	169	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	302	305	first strand
Strand 2	A	567	571	anti-parallel
Strand 3	A	581	584	anti-parallel
Strand 4	A	621	623	anti-parallel
Strand 5	A	614	616	anti-parallel

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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	316	319	first strand
Strand 2	A	510	515	parallel
Strand 3	A	522	526	anti-parallel
Strand 4	A	556	560	anti-parallel
Strand 5	A	545	549	anti-parallel
Strand 6	A	537	539	anti-parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	348	349	first strand
Strand 2	A	386	394	anti-parallel
Strand 3	A	479	486	anti-parallel
Strand 4	A	422	428	anti-parallel
Strand 5	A	367	371	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	352	353	first strand
Strand 2	A	496	497	parallel
Strand 3	A	382	383	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	435	440	first strand
Strand 2	A	464	469	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	626	627	first strand
Strand 2	A	659	664	parallel
Strand 3	A	642	647	anti-parallel
Strand 4	A	636	637	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	669	671	first strand
Strand 2	C	755	757	parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	680	681	first strand
Strand 2	A	1042	1046	anti-parallel
Strand 3	A	1062	1065	anti-parallel
Strand 4	A	1070	1073	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	686	696	first strand
Strand 2	A	1027	1037	anti-parallel
Strand 3	A	1015	1024	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	702	704	first strand
Strand 2	A	826	828	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	755	757	first strand
Strand 2	B	669	671	parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	764	765	first strand
Strand 2	A	768	769	anti-parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1088	1091	first strand
Strand 2	A	1055	1058	anti-parallel
Strand 3	A	1049	1050	anti-parallel
Strand 4	A	1101	1102	parallel

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There are 7 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	32	34	first strand
Strand 2	B	65	70	anti-parallel
Strand 3	B	255	258	anti-parallel
Strand 4	B	93	99	anti-parallel
Strand 5	B	185	194	anti-parallel
Strand 6	B	197	206	anti-parallel
Strand 7	B	221	226	anti-parallel

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There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	54	59	first strand
Strand 2	B	262	270	anti-parallel
Strand 3	B	276	281	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	107	108	first strand
Strand 2	B	236	237	anti-parallel

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There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	122	124	first strand
Strand 2	B	129	136	anti-parallel
Strand 3	B	160	168	anti-parallel

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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	150	152	first strand
Strand 2	B	143	147	anti-parallel
Strand 3	B	239	241	parallel

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There are 5 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	302	306	first strand
Strand 2	B	567	571	anti-parallel
Strand 3	B	581	584	anti-parallel
Strand 4	B	620	623	anti-parallel
Strand 5	B	614	617	anti-parallel

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There are 5 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	348	349	first strand
Strand 2	B	386	394	anti-parallel
Strand 3	B	479	486	anti-parallel
Strand 4	B	422	428	anti-parallel
Strand 5	B	367	371	anti-parallel

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There are 3 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	352	353	first strand
Strand 2	B	496	497	parallel
Strand 3	B	382	383	anti-parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	435	439	first strand
Strand 2	B	465	469	anti-parallel

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There are 5 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	510	515	first strand
Strand 2	B	518	526	anti-parallel
Strand 3	B	555	560	anti-parallel
Strand 4	B	545	550	anti-parallel
Strand 5	B	537	539	anti-parallel

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There are 4 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	626	627	first strand
Strand 2	B	659	664	parallel
Strand 3	B	642	647	anti-parallel
Strand 4	B	636	639	anti-parallel

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There are 5 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	680	681	first strand
Strand 2	B	1042	1045	anti-parallel
Strand 3	B	1062	1065	anti-parallel
Strand 4	B	1070	1074	anti-parallel
Strand 5	B	1077	1082	anti-parallel

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There are 3 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	686	696	first strand
Strand 2	B	1027	1037	anti-parallel
Strand 3	B	1015	1024	anti-parallel

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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	702	704	first strand
Strand 2	B	826	828	anti-parallel

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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	755	757	first strand
Strand 2	C	669	671	parallel

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There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	764	765	first strand
Strand 2	B	768	769	anti-parallel

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There are 4 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1088	1091	first strand
Strand 2	B	1055	1058	anti-parallel
Strand 3	B	1049	1050	anti-parallel
Strand 4	B	1101	1102	parallel

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There are 7 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	32	34	first strand
Strand 2	C	65	70	anti-parallel
Strand 3	C	254	260	anti-parallel
Strand 4	C	92	99	anti-parallel
Strand 5	C	183	194	anti-parallel
Strand 6	C	197	209	anti-parallel
Strand 7	C	221	227	anti-parallel

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There are 3 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	54	59	first strand
Strand 2	C	262	270	anti-parallel
Strand 3	C	276	281	anti-parallel

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There are 6 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	143	145	first strand
Strand 2	C	236	241	parallel
Strand 3	C	106	108	anti-parallel
Strand 4	C	119	124	anti-parallel
Strand 5	C	129	136	anti-parallel
Strand 6	C	160	166	anti-parallel

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There are 5 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	302	305	first strand
Strand 2	C	567	571	anti-parallel
Strand 3	C	581	584	anti-parallel
Strand 4	C	621	623	anti-parallel
Strand 5	C	614	616	anti-parallel

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There are 3 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	316	319	first strand
Strand 2	C	510	515	parallel
Strand 3	C	518	519	anti-parallel

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There are 6 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	316	319	first strand
Strand 2	C	510	515	parallel
Strand 3	C	522	526	anti-parallel
Strand 4	C	556	560	anti-parallel
Strand 5	C	547	549	anti-parallel
Strand 6	C	537	538	anti-parallel

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There are 5 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	348	349	first strand
Strand 2	C	386	394	anti-parallel
Strand 3	C	479	486	anti-parallel
Strand 4	C	422	428	anti-parallel
Strand 5	C	367	371	anti-parallel

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There are 3 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	352	353	first strand
Strand 2	C	496	497	parallel
Strand 3	C	382	383	anti-parallel

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There are 2 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	435	440	first strand
Strand 2	C	464	469	anti-parallel

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There are 4 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	626	627	first strand
Strand 2	C	659	664	parallel
Strand 3	C	642	647	anti-parallel
Strand 4	C	636	637	anti-parallel

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There are 4 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	680	681	first strand
Strand 2	C	1042	1046	anti-parallel
Strand 3	C	1062	1065	anti-parallel
Strand 4	C	1070	1073	anti-parallel

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There are 3 strands in AF1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	686	696	first strand
Strand 2	C	1027	1037	anti-parallel
Strand 3	C	1015	1024	anti-parallel

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There are 2 strands in AF2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	701	704	first strand
Strand 2	C	826	829	anti-parallel

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There are 2 strands in AF3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	764	765	first strand
Strand 2	C	768	769	anti-parallel

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There are 3 strands in AF4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1049	1050	first strand
Strand 2	C	1055	1058	anti-parallel
Strand 3	C	1088	1091	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8ZY7

Analysis of interatomic Contacts of Structural Units in PDB entry:
8ZY7