Analysis of interatomic Contacts of Structural Units in PDB entry:
8ZYO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8ZYO entry

There are 4 chains in PDB entry 8ZYO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 407ARG 665
B
 LYS 407ARG 665
C
 LYS 407ARG 665
D
 LYS 407ARG 665
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 45 helices in PDB entry 8ZYO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
409 432Right-handed alpha
Helix 2
AA2
A
453 470Right-handed alpha
Helix 3
AA3
A
489 495Right-handed alpha
Helix 4
AA4
A
497 504Right-handed alpha
Helix 5
AA5
A
521 525Right-handed alpha
Helix 6
AA6
A
526 530Right-handed 310
Helix 7
AA7
A
531 538Right-handed alpha
Helix 8
AA8
A
539 543Right-handed 310
Helix 9
AA9
A
545 575Right-handed alpha
Helix 10
AB1
A
584 593Right-handed alpha
Helix 11
AB2
A
606 624Right-handed alpha
Helix 12
AB3
A
634 656Right-handed alpha
Helix 13
AB4
A
658 665Right-handed alpha
Helix 14
AB5
B
408 431Right-handed alpha
Helix 15
AB6
B
453 471Right-handed alpha
Helix 16
AB7
B
499 505Right-handed alpha
Helix 17
AB8
B
521 525Right-handed alpha
Helix 18
AB9
B
526 530Right-handed 310
Helix 19
AC1
B
531 538Right-handed alpha
Helix 20
AC2
B
538 543Right-handed alpha
Helix 21
AC3
B
547 575Right-handed alpha
Helix 22
AC4
B
584 593Right-handed alpha
Helix 23
AC5
B
606 623Right-handed alpha
Helix 24
AC6
B
634 663Right-handed alpha
Helix 25
AC7
C
408 432Right-handed alpha
Helix 26
AC8
C
521 526Right-handed alpha
Helix 27
AC9
C
527 531Right-handed 310
Helix 28
AD1
C
532 538Right-handed alpha
Helix 29
AD2
C
539 541Right-handed 310
Helix 30
AD3
C
545 576Right-handed alpha
Helix 31
AD4
C
585 594Right-handed alpha
Helix 32
AD5
C
606 623Right-handed alpha
Helix 33
AD6
C
634 665Right-handed alpha
Helix 34
AD7
D
408 431Right-handed alpha
Helix 35
AD8
D
453 470Right-handed alpha
Helix 36
AD9
D
489 494Right-handed alpha
Helix 37
AE1
D
498 503Right-handed alpha
Helix 38
AE2
D
521 526Right-handed alpha
Helix 39
AE3
D
527 530Right-handed 310
Helix 40
AE4
D
531 538Right-handed alpha
Helix 41
AE5
D
538 543Right-handed alpha
Helix 42
AE6
D
545 575Right-handed alpha
Helix 43
AE7
D
584 593Right-handed alpha
Helix 44
AE8
D
606 623Right-handed alpha
Helix 45
AE9
D
634 665Right-handed alpha
Back to top of page
There are no sheets in PDB entry 8ZYO
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il