Analysis of interatomic Contacts of Structural Units in PDB entry:
9AR6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9AR6 entry

There are 4 chains in PDB entry 9AR6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1SER 1073
D
 A 29 T 40
P
 A 1 C 30
B
 G 5 U 146
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 41 helices in PDB entry 9AR6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
46 77Right-handed alpha
Helix 2
AA2
A
81 87Right-handed alpha
Helix 3
AA3
A
96 103Right-handed alpha
Helix 4
AA4
A
110 124Right-handed alpha
Helix 5
AA5
A
143 154Right-handed alpha
Helix 6
AA6
A
159 167Right-handed alpha
Helix 7
AA7
A
186 204Right-handed alpha
Helix 8
AA8
A
210 222Right-handed alpha
Helix 9
AA9
A
231 236Right-handed alpha
Helix 10
AB1
A
253 267Right-handed alpha
Helix 11
AB2
A
283 292Right-handed alpha
Helix 12
AB3
A
299 307Right-handed alpha
Helix 13
AB4
A
324 329Right-handed alpha
Helix 14
AB5
A
336 351Right-handed alpha
Helix 15
AB6
A
359 372Right-handed alpha
Helix 16
AB7
A
375 384Right-handed alpha
Helix 17
AB8
A
404 411Right-handed alpha
Helix 18
AB9
A
425 434Right-handed alpha
Helix 19
AC1
A
438 444Right-handed alpha
Helix 20
AC2
A
470 492Right-handed alpha
Helix 21
AC3
A
508 536Right-handed alpha
Helix 22
AC4
A
542 550Right-handed alpha
Helix 23
AC5
A
551 554Right-handed 310
Helix 24
AC6
A
568 572Right-handed 310
Helix 25
AC7
A
585 590Right-handed alpha
Helix 26
AC8
A
602 609Right-handed alpha
Helix 27
AC9
A
612 618Right-handed alpha
Helix 28
AD1
A
621 632Right-handed alpha
Helix 29
AD2
A
640 646Right-handed alpha
Helix 30
AD3
A
651 664Right-handed alpha
Helix 31
AD4
A
667 681Right-handed alpha
Helix 32
AD5
A
696 707Right-handed alpha
Helix 33
AD6
A
718 729Right-handed alpha
Helix 34
AD7
A
731 748Right-handed alpha
Helix 35
AD8
A
766 774Right-handed alpha
Helix 36
AD9
A
777 786Right-handed alpha
Helix 37
AE1
A
791 796Right-handed alpha
Helix 38
AE2
A
842 844Right-handed 310
Helix 39
AE3
A
860 870Right-handed alpha
Helix 40
AE4
A
945 951Right-handed alpha
Helix 41
AE5
A
963 967Right-handed 310
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There are 11 sheets in PDB entry 9AR6. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
692 694first strand
Strand 2
A
496 501parallel
Strand 3
A
3 9parallel
Strand 4
A
13 20anti-parallel
Strand 5
A
25 33anti-parallel
Strand 6
A
804 805parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
249 250first strand
Strand 2
A
418 419anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
276 277first strand
Strand 2
A
269 271anti-parallel
Strand 3
A
313 315anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
297 298first strand
Strand 2
A
332 334anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
388 389first strand
Strand 2
A
392 393anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
578 582first strand
Strand 2
A
597 601anti-parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
901 908first strand
Strand 2
A
833 840anti-parallel
Strand 3
A
821 826anti-parallel
Strand 4
A
919 922anti-parallel
Strand 5
A
911 914anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
886 889first strand
Strand 2
A
895 899anti-parallel
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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
937 944first strand
Strand 2
A
926 934anti-parallel
Strand 3
A
975 980anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
956 957first strand
Strand 2
A
968 969anti-parallel
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There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1033 1038first strand
Strand 2
A
1022 1026anti-parallel
Strand 3
A
1003 1016anti-parallel
Strand 4
A
984 997anti-parallel
Strand 5
A
1044 1050anti-parallel
Strand 6
A
1056 1058anti-parallel
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