Analysis of interatomic Contacts of Structural Units in PDB entry:
9ASK


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9ASK entry

There are 2 chains in PDB entry 9ASK (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 68LEU 891
B
 LYS 68LEU 891
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 75 helices in PDB entry 9ASK. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
77 88Right-handed alpha
Helix 2
AA2
A
93 102Right-handed alpha
Helix 3
AA3
A
116 120Right-handed 310
Helix 4
AA4
A
121 136Right-handed alpha
Helix 5
AA5
A
146 162Right-handed alpha
Helix 6
AA6
A
191 204Right-handed alpha
Helix 7
AA7
A
218 222Right-handed 310
Helix 8
AA8
A
226 245Right-handed alpha
Helix 9
AA9
A
270 278Right-handed alpha
Helix 10
AB1
A
325 335Right-handed alpha
Helix 11
AB2
A
346 365Right-handed alpha
Helix 12
AB3
A
384 394Right-handed alpha
Helix 13
AB4
A
402 407Right-handed alpha
Helix 14
AB5
A
408 412Right-handed 310
Helix 15
AB6
A
423 435Right-handed alpha
Helix 16
AB7
A
443 449Right-handed 310
Helix 17
AB8
A
470 479Right-handed alpha
Helix 18
AB9
A
499 510Right-handed alpha
Helix 19
AC1
A
528 540Right-handed alpha
Helix 20
AC2
A
546 555Right-handed alpha
Helix 21
AC3
A
557 563Right-handed alpha
Helix 22
AC4
A
581 592Right-handed alpha
Helix 23
AC5
A
612 622Right-handed alpha
Helix 24
AC6
A
624 636Right-handed alpha
Helix 25
AC7
A
637 639Right-handed 310
Helix 26
AC8
A
647 653Right-handed alpha
Helix 27
AC9
A
665 676Right-handed alpha
Helix 28
AD1
A
679 687Right-handed alpha
Helix 29
AD2
A
710 730Right-handed alpha
Helix 30
AD3
A
733 742Right-handed alpha
Helix 31
AD4
A
744 769Right-handed alpha
Helix 32
AD5
A
771 779Right-handed alpha
Helix 33
AD6
A
780 788Right-handed alpha
Helix 34
AD7
A
795 799Right-handed 310
Helix 35
AD8
A
807 813Right-handed alpha
Helix 36
AD9
A
817 822Right-handed alpha
Helix 37
AE1
A
827 835Right-handed alpha
Helix 38
AE2
A
871 890Right-handed alpha
Helix 39
AE3
B
77 87Right-handed alpha
Helix 40
AE4
B
94 101Right-handed alpha
Helix 41
AE5
B
116 119Right-handed 310
Helix 42
AE6
B
120 136Right-handed alpha
Helix 43
AE7
B
146 162Right-handed alpha
Helix 44
AE8
B
191 204Right-handed alpha
Helix 45
AE9
B
217 222Right-handed 310
Helix 46
AF1
B
226 245Right-handed alpha
Helix 47
AF2
B
270 278Right-handed alpha
Helix 48
AF3
B
325 335Right-handed alpha
Helix 49
AF4
B
346 367Right-handed alpha
Helix 50
AF5
B
384 394Right-handed alpha
Helix 51
AF6
B
402 407Right-handed alpha
Helix 52
AF7
B
408 412Right-handed 310
Helix 53
AF8
B
423 435Right-handed alpha
Helix 54
AF9
B
443 449Right-handed 310
Helix 55
AG1
B
470 478Right-handed alpha
Helix 56
AG2
B
499 510Right-handed alpha
Helix 57
AG3
B
528 540Right-handed alpha
Helix 58
AG4
B
546 555Right-handed alpha
Helix 59
AG5
B
557 563Right-handed alpha
Helix 60
AG6
B
581 592Right-handed alpha
Helix 61
AG7
B
612 622Right-handed alpha
Helix 62
AG8
B
624 635Right-handed alpha
Helix 63
AG9
B
647 653Right-handed alpha
Helix 64
AH1
B
665 676Right-handed alpha
Helix 65
AH2
B
679 687Right-handed alpha
Helix 66
AH3
B
710 729Right-handed alpha
Helix 67
AH4
B
733 742Right-handed alpha
Helix 68
AH5
B
744 769Right-handed alpha
Helix 69
AH6
B
773 779Right-handed alpha
Helix 70
AH7
B
780 788Right-handed alpha
Helix 71
AH8
B
795 799Right-handed 310
Helix 72
AH9
B
807 813Right-handed alpha
Helix 73
AI1
B
817 822Right-handed alpha
Helix 74
AI2
B
827 835Right-handed alpha
Helix 75
AI3
B
871 890Right-handed alpha
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There are 10 sheets in PDB entry 9ASK. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
168 169first strand
Strand 2
A
186 190parallel
Strand 3
A
139 144parallel
Strand 4
A
210 216parallel
Strand 5
A
260 265parallel
Strand 6
A
111 114parallel
Strand 7
A
281 284parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
309 312first strand
Strand 2
A
301 303anti-parallel
Strand 3
A
292 297anti-parallel
Strand 4
A
490 495parallel
Strand 5
A
456 459parallel
Strand 6
A
340 343parallel
Strand 7
A
439 442parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
463 464first strand
Strand 2
A
467 468anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
595 598first strand
Strand 2
A
608 611anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
862 863first strand
Strand 2
A
869 870anti-parallel
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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
168 169first strand
Strand 2
B
186 190parallel
Strand 3
B
140 144parallel
Strand 4
B
212 214parallel
Strand 5
B
260 265parallel
Strand 6
B
111 114parallel
Strand 7
B
281 284parallel
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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
309 312first strand
Strand 2
B
301 303anti-parallel
Strand 3
B
292 298anti-parallel
Strand 4
B
490 494parallel
Strand 5
B
456 459parallel
Strand 6
B
340 343parallel
Strand 7
B
439 442parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
463 464first strand
Strand 2
B
467 468anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
595 598first strand
Strand 2
B
608 611anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
862 863first strand
Strand 2
B
869 870anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il