Analysis of interatomic Contacts of Structural Units in PDB entry:
9ATC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9ATC entry

There are 2 chains in PDB entry 9ATC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 1LEU 310
B
 GLN 8ASN 153
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 9ATC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
17 32Right-handed alpha
Helix 2
2
A
53 66Right-handed alpha
Helix 3
3
A
88 97Right-handed alpha
Helix 4
4
A
111 117Right-handed alpha
Helix 5
5
A
135 149Right-handed alpha
Helix 6
6
A
167 178Right-handed alpha
Helix 7
7
A
198 204Right-handed alpha
Helix 8
8
A
215 217Right-handed 310
Helix 9
9
A
232 234Right-handed 310
Helix 10
10
A
237 246Right-handed alpha
Helix 11
11
A
251 255Right-handed 310
Helix 12
12
A
285 303Right-handed alpha
Helix 13
13
B
27 32Right-handed alpha
Helix 14
14
B
68 72Right-handed alpha
Helix 15
15
B
74 78Right-handed 310
Helix 16
16
B
115 117Right-handed 310
Helix 17
17
B
147 150Right-handed alpha
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There are 3 sheets in PDB entry 9ATC. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
69 74first strand
Strand 2
A
43 48parallel
Strand 3
A
101 105parallel
Strand 4
A
123 126parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
262 265first strand
Strand 2
A
224 227parallel
Strand 3
A
156 161parallel
Strand 4
A
183 188parallel
Strand 5
A
209 212parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
102 104first strand
Strand 2
B
124 128anti-parallel
Strand 3
B
135 138anti-parallel
Strand 4
B
144 146anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il