Analysis of interatomic Contacts of Structural Units in PDB entry:
9ATQ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9ATQ entry

There are 3 chains in PDB entry 9ATQ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLN 14	SER 1143
B	GLN 14	SER 1143
C	GLN 14	SER 1143

There are 66 helices in PDB entry 9ATQ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	290	300	Right-handed alpha
Helix 2	AA2	A	333	337	Right-handed 310
Helix 3	AA3	A	360	366	Right-handed alpha
Helix 4	AA4	A	380	384	Right-handed 310
Helix 5	AA5	A	401	403	Right-handed 310
Helix 6	AA6	A	412	418	Right-handed alpha
Helix 7	AA7	A	434	439	Right-handed alpha
Helix 8	AA8	A	612	616	Right-handed 310
Helix 9	AA9	A	733	740	Right-handed alpha
Helix 10	AB1	A	742	751	Right-handed alpha
Helix 11	AB2	A	754	779	Right-handed alpha
Helix 12	AB3	A	812	822	Right-handed alpha
Helix 13	AB4	A	845	852	Right-handed alpha
Helix 14	AB5	A	862	880	Right-handed alpha
Helix 15	AB6	A	893	905	Right-handed alpha
Helix 16	AB7	A	908	915	Right-handed alpha
Helix 17	AB8	A	915	937	Right-handed alpha
Helix 18	AB9	A	941	961	Right-handed alpha
Helix 19	AC1	A	962	964	Right-handed 310
Helix 20	AC2	A	972	980	Right-handed alpha
Helix 21	AC3	A	981	1029	Right-handed alpha
Helix 22	AC4	A	1136	1143	Right-handed alpha
Helix 23	AC5	B	290	300	Right-handed alpha
Helix 24	AC6	B	333	339	Right-handed alpha
Helix 25	AC7	B	361	367	Right-handed alpha
Helix 26	AC8	B	379	386	Right-handed 310
Helix 27	AC9	B	412	418	Right-handed alpha
Helix 28	AD1	B	434	439	Right-handed alpha
Helix 29	AD2	B	612	616	Right-handed 310
Helix 30	AD3	B	733	740	Right-handed alpha
Helix 31	AD4	B	742	751	Right-handed alpha
Helix 32	AD5	B	754	779	Right-handed alpha
Helix 33	AD6	B	812	822	Right-handed alpha
Helix 34	AD7	B	845	851	Right-handed alpha
Helix 35	AD8	B	862	881	Right-handed alpha
Helix 36	AD9	B	893	905	Right-handed alpha
Helix 37	AE1	B	908	915	Right-handed alpha
Helix 38	AE2	B	915	937	Right-handed alpha
Helix 39	AE3	B	941	961	Right-handed alpha
Helix 40	AE4	B	962	964	Right-handed 310
Helix 41	AE5	B	972	980	Right-handed alpha
Helix 42	AE6	B	981	1029	Right-handed alpha
Helix 43	AE7	B	1136	1143	Right-handed alpha
Helix 44	AE8	C	290	300	Right-handed alpha
Helix 45	AE9	C	334	339	Right-handed alpha
Helix 46	AF1	C	360	366	Right-handed alpha
Helix 47	AF2	C	380	384	Right-handed 310
Helix 48	AF3	C	401	403	Right-handed 310
Helix 49	AF4	C	412	418	Right-handed alpha
Helix 50	AF5	C	434	439	Right-handed alpha
Helix 51	AF6	C	612	616	Right-handed 310
Helix 52	AF7	C	733	739	Right-handed alpha
Helix 53	AF8	C	742	750	Right-handed alpha
Helix 54	AF9	C	751	753	Right-handed 310
Helix 55	AG1	C	754	779	Right-handed alpha
Helix 56	AG2	C	812	822	Right-handed alpha
Helix 57	AG3	C	845	851	Right-handed alpha
Helix 58	AG4	C	862	880	Right-handed alpha
Helix 59	AG5	C	893	905	Right-handed alpha
Helix 60	AG6	C	908	915	Right-handed alpha
Helix 61	AG7	C	915	937	Right-handed alpha
Helix 62	AG8	C	941	961	Right-handed alpha
Helix 63	AG9	C	962	964	Right-handed 310
Helix 64	AH1	C	972	980	Right-handed alpha
Helix 65	AH2	C	981	1029	Right-handed alpha
Helix 66	AH3	C	1136	1143	Right-handed alpha

There are 45 sheets in PDB entry 9ATQ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	20	27	first strand
Strand 2	A	58	66	anti-parallel
Strand 3	A	257	265	anti-parallel
Strand 4	A	87	91	anti-parallel
Strand 5	A	185	193	anti-parallel
Strand 6	A	196	204	anti-parallel
Strand 7	A	220	225	anti-parallel

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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	39	40	first strand
Strand 2	C	561	563	parallel
Strand 3	C	569	573	anti-parallel
Strand 4	C	580	584	anti-parallel
Strand 5	C	542	550	anti-parallel
Strand 6	C	534	539	anti-parallel
Strand 7	C	321	324	parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	44	52	first strand
Strand 2	A	267	275	anti-parallel
Strand 3	A	281	286	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	81	82	first strand
Strand 2	A	233	241	anti-parallel
Strand 3	A	138	140	parallel

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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	81	82	first strand
Strand 2	A	233	241	anti-parallel
Strand 3	A	98	104	anti-parallel
Strand 4	A	113	118	anti-parallel
Strand 5	A	123	132	anti-parallel
Strand 6	A	156	168	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	307	315	first strand
Strand 2	A	588	595	anti-parallel
Strand 3	A	605	609	anti-parallel
Strand 4	A	644	647	anti-parallel
Strand 5	A	638	640	anti-parallel

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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	321	324	first strand
Strand 2	A	534	539	parallel
Strand 3	A	542	550	anti-parallel
Strand 4	A	580	584	anti-parallel
Strand 5	A	569	573	anti-parallel
Strand 6	A	561	563	anti-parallel
Strand 7	B	39	40	parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	350	354	first strand
Strand 2	A	390	399	anti-parallel
Strand 3	A	503	512	anti-parallel
Strand 4	A	427	433	anti-parallel
Strand 5	A	372	376	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	357	358	first strand
Strand 2	A	520	521	parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	448	450	first strand
Strand 2	A	488	490	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	469	470	first strand
Strand 2	A	484	485	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	650	651	first strand
Strand 2	A	689	692	parallel
Strand 3	A	666	669	anti-parallel
Strand 4	A	660	663	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	697	698	first strand
Strand 2	B	783	784	parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	707	724	first strand
Strand 2	A	1055	1074	anti-parallel
Strand 3	A	1043	1052	anti-parallel

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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	707	724	first strand
Strand 2	A	1055	1074	anti-parallel
Strand 3	A	1090	1093	anti-parallel
Strand 4	A	1098	1101	anti-parallel
Strand 5	A	1109	1110	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	730	732	first strand
Strand 2	A	854	856	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	783	784	first strand
Strand 2	C	697	698	parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1116	1118	first strand
Strand 2	A	1082	1086	anti-parallel
Strand 3	A	1077	1079	anti-parallel
Strand 4	A	1129	1130	parallel

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There are 7 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	20	27	first strand
Strand 2	B	58	66	anti-parallel
Strand 3	B	257	265	anti-parallel
Strand 4	B	87	91	anti-parallel
Strand 5	B	184	193	anti-parallel
Strand 6	B	196	205	anti-parallel
Strand 7	B	220	221	anti-parallel

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There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	44	52	first strand
Strand 2	B	267	275	anti-parallel
Strand 3	B	281	286	anti-parallel

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There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	81	82	first strand
Strand 2	B	233	241	anti-parallel
Strand 3	B	138	140	parallel

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There are 6 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	81	82	first strand
Strand 2	B	233	241	anti-parallel
Strand 3	B	98	104	anti-parallel
Strand 4	B	113	118	anti-parallel
Strand 5	B	123	132	anti-parallel
Strand 6	B	156	168	anti-parallel

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There are 5 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	307	315	first strand
Strand 2	B	588	595	anti-parallel
Strand 3	B	605	609	anti-parallel
Strand 4	B	644	647	anti-parallel
Strand 5	B	638	640	anti-parallel

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There are 7 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	321	324	first strand
Strand 2	B	535	539	parallel
Strand 3	B	542	549	anti-parallel
Strand 4	B	580	584	anti-parallel
Strand 5	B	569	573	anti-parallel
Strand 6	B	561	563	anti-parallel
Strand 7	C	39	40	parallel

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There are 5 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	350	354	first strand
Strand 2	B	391	398	anti-parallel
Strand 3	B	504	509	anti-parallel
Strand 4	B	428	433	anti-parallel
Strand 5	B	372	375	anti-parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	448	450	first strand
Strand 2	B	488	490	anti-parallel

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There are 4 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	650	651	first strand
Strand 2	B	689	692	parallel
Strand 3	B	666	669	anti-parallel
Strand 4	B	660	663	anti-parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	697	698	first strand
Strand 2	C	783	784	parallel

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There are 3 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	707	724	first strand
Strand 2	B	1055	1074	anti-parallel
Strand 3	B	1043	1052	anti-parallel

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There are 5 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	707	724	first strand
Strand 2	B	1055	1074	anti-parallel
Strand 3	B	1090	1093	anti-parallel
Strand 4	B	1098	1101	anti-parallel
Strand 5	B	1109	1110	anti-parallel

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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	729	732	first strand
Strand 2	B	854	857	anti-parallel

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There are 4 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1116	1118	first strand
Strand 2	B	1082	1086	anti-parallel
Strand 3	B	1077	1079	anti-parallel
Strand 4	B	1129	1130	parallel

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There are 7 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	20	27	first strand
Strand 2	C	58	66	anti-parallel
Strand 3	C	257	265	anti-parallel
Strand 4	C	87	91	anti-parallel
Strand 5	C	184	193	anti-parallel
Strand 6	C	196	205	anti-parallel
Strand 7	C	220	223	anti-parallel

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There are 3 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	44	52	first strand
Strand 2	C	267	275	anti-parallel
Strand 3	C	281	286	anti-parallel

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There are 3 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	81	82	first strand
Strand 2	C	233	241	anti-parallel
Strand 3	C	138	140	parallel

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There are 6 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	81	82	first strand
Strand 2	C	233	241	anti-parallel
Strand 3	C	98	104	anti-parallel
Strand 4	C	113	117	anti-parallel
Strand 5	C	123	132	anti-parallel
Strand 6	C	156	168	anti-parallel

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There are 5 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	307	315	first strand
Strand 2	C	588	595	anti-parallel
Strand 3	C	605	609	anti-parallel
Strand 4	C	644	647	anti-parallel
Strand 5	C	638	640	anti-parallel

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There are 5 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	350	354	first strand
Strand 2	C	390	399	anti-parallel
Strand 3	C	503	512	anti-parallel
Strand 4	C	427	433	anti-parallel
Strand 5	C	375	376	anti-parallel

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There are 2 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	448	450	first strand
Strand 2	C	488	490	anti-parallel

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There are 2 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	469	470	first strand
Strand 2	C	484	485	anti-parallel

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There are 4 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	650	651	first strand
Strand 2	C	689	692	parallel
Strand 3	C	666	669	anti-parallel
Strand 4	C	660	663	anti-parallel

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There are 3 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	707	724	first strand
Strand 2	C	1055	1072	anti-parallel
Strand 3	C	1043	1052	anti-parallel

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There are 2 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	729	732	first strand
Strand 2	C	854	857	anti-parallel

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There are 4 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1116	1118	first strand
Strand 2	C	1082	1086	anti-parallel
Strand 3	C	1077	1079	anti-parallel
Strand 4	C	1129	1130	parallel

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There are 2 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1090	1093	first strand
Strand 2	C	1098	1101	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9ATQ

Analysis of interatomic Contacts of Structural Units in PDB entry:
9ATQ