Analysis of interatomic Contacts of Structural Units in PDB entry:
9AUY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9AUY entry

There is 1 chain in PDB entry 9AUY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 0PRO 466
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 9AUY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
12 14Right-handed 310
Helix 2
AA2
A
26 30Right-handed 310
Helix 3
AA3
A
56 66Right-handed alpha
Helix 4
AA4
A
77 90Right-handed alpha
Helix 5
AA5
A
231 242Right-handed alpha
Helix 6
AA6
A
256 270Right-handed alpha
Helix 7
AA7
A
282 293Right-handed alpha
Helix 8
AA8
A
308 314Right-handed alpha
Helix 9
AA9
A
318 334Right-handed alpha
Helix 10
AB1
A
345 355Right-handed alpha
Helix 11
AB2
A
363 368Right-handed alpha
Helix 12
AB3
A
392 397Right-handed alpha
Helix 13
AB4
A
428 447Right-handed alpha
Helix 14
AB5
A
451 459Right-handed alpha
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There are 4 sheets in PDB entry 9AUY. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
16 18first strand
Strand 2
A
461 463anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
34 35first strand
Strand 2
A
41 42anti-parallel
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There are 9 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
46 48first strand
Strand 2
A
69 72parallel
Strand 3
A
223 226parallel
Strand 4
A
246 250parallel
Strand 5
A
274 280parallel
Strand 6
A
296 299parallel
Strand 7
A
336 340parallel
Strand 8
A
359 362parallel
Strand 9
A
46 48parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
377 379first strand
Strand 2
A
382 388anti-parallel
Strand 3
A
420 424anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il