Analysis of interatomic Contacts of Structural Units in PDB entry:
9AX5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9AX5 entry

There are 2 chains in PDB entry 9AX5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 839PRO 2090
C
 ILE 4ALA 181
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 42 helices in PDB entry 9AX5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
851 861Right-handed alpha
Helix 2
AA2
A
949 958Right-handed alpha
Helix 3
AA3
A
963 967Right-handed alpha
Helix 4
AA4
A
988 1010Right-handed alpha
Helix 5
AA5
A
1015 1029Right-handed alpha
Helix 6
AA6
A
1038 1046Right-handed alpha
Helix 7
AA7
A
1195 1209Right-handed alpha
Helix 8
AA8
A
1212 1222Right-handed alpha
Helix 9
AA9
A
1273 1288Right-handed alpha
Helix 10
AB1
A
1306 1317Right-handed alpha
Helix 11
AB2
A
1323 1335Right-handed alpha
Helix 12
AB3
A
1337 1343Right-handed alpha
Helix 13
AB4
A
1347 1356Right-handed alpha
Helix 14
AB5
A
1357 1361Right-handed 310
Helix 15
AB6
A
1373 1377Right-handed 310
Helix 16
AB7
A
1378 1380Right-handed 310
Helix 17
AB8
A
1404 1412Right-handed alpha
Helix 18
AB9
A
1443 1454Right-handed alpha
Helix 19
AC1
A
1471 1486Right-handed alpha
Helix 20
AC2
A
1496 1501Right-handed 310
Helix 21
AC3
A
1645 1650Right-handed alpha
Helix 22
AC4
A
1741 1751Right-handed alpha
Helix 23
AC5
A
1751 1760Right-handed alpha
Helix 24
AC6
A
1780 1785Right-handed alpha
Helix 25
AC7
A
1799 1810Right-handed alpha
Helix 26
AC8
A
1811 1815Right-handed 310
Helix 27
AC9
A
1936 1938Right-handed 310
Helix 28
AD1
A
1978 1983Right-handed alpha
Helix 29
AD2
A
1984 1991Right-handed alpha
Helix 30
AD3
A
2016 2028Right-handed alpha
Helix 31
AD4
A
2034 2038Right-handed 310
Helix 32
AD5
A
2068 2074Right-handed alpha
Helix 33
AD6
A
2075 2076Right-handed 310
Helix 34
AD7
A
2077 2081Right-handed 310
Helix 35
AD8
C
17 28Right-handed alpha
Helix 36
AD9
C
63 68Right-handed alpha
Helix 37
AE1
C
69 73Right-handed 310
Helix 38
AE2
C
88 107Right-handed alpha
Helix 39
AE3
C
119 123Right-handed 310
Helix 40
AE4
C
124 135Right-handed alpha
Helix 41
AE5
C
140 151Right-handed alpha
Helix 42
AE6
C
166 180Right-handed alpha
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There are 9 sheets in PDB entry 9AX5. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
931 934first strand
Strand 2
A
887 891anti-parallel
Strand 3
A
873 881anti-parallel
Strand 4
A
862 868anti-parallel
Strand 5
A
984 986anti-parallel
Strand 6
A
968 973anti-parallel
Strand 7
A
938 943anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1737 1740first strand
Strand 2
A
1764 1767parallel
Strand 3
A
1790 1793parallel
Strand 4
A
1382 1387parallel
Strand 5
A
1817 1819anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1416 1419first strand
Strand 2
A
1462 1466parallel
Strand 3
A
1516 1519parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1430 1431first strand
Strand 2
A
1441 1442anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1845 1846first strand
Strand 2
A
1976 1977parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1901 1907first strand
Strand 2
A
1848 1858anti-parallel
Strand 3
A
1959 1966anti-parallel
Strand 4
A
1941 1945anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1884 1886first strand
Strand 2
A
1869 1876anti-parallel
Strand 3
A
1914 1921anti-parallel
Strand 4
A
1926 1934anti-parallel
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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2006 2011first strand
Strand 2
A
1993 1998anti-parallel
Strand 3
A
2083 2089parallel
Strand 4
A
2039 2045anti-parallel
Strand 5
A
2059 2062anti-parallel
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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
40 48first strand
Strand 2
C
51 59anti-parallel
Strand 3
C
5 11parallel
Strand 4
C
79 85parallel
Strand 5
C
112 117parallel
Strand 6
C
155 158parallel
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