Analysis of interatomic Contacts of Structural Units in PDB entry:
9AYB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9AYB entry

There is 1 chain in PDB entry 9AYB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 34ASP 489
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 25 helices in PDB entry 9AYB. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
37 68Right-handed alpha
Helix 2
AA2
A
104 120Right-handed alpha
Helix 3
AA3
A
122 134Right-handed alpha
Helix 4
AA4
A
134 152Right-handed alpha
Helix 5
AA5
A
152 160Right-handed alpha
Helix 6
AA6
A
160 176Right-handed alpha
Helix 7
AA7
A
177 187Right-handed alpha
Helix 8
AA8
A
191 193Right-handed 310
Helix 9
AA9
A
194 224Right-handed alpha
Helix 10
AB1
A
226 248Right-handed alpha
Helix 11
AB2
A
251 255Right-handed 310
Helix 12
AB3
A
259 270Right-handed alpha
Helix 13
AB4
A
281 288Right-handed alpha
Helix 14
AB5
A
288 319Right-handed alpha
Helix 15
AB6
A
323 328Right-handed alpha
Helix 16
AB7
A
328 355Right-handed alpha
Helix 17
AB8
A
359 382Right-handed alpha
Helix 18
AB9
A
388 403Right-handed alpha
Helix 19
AC1
A
404 408Right-handed 310
Helix 20
AC2
A
409 411Right-handed 310
Helix 21
AC3
A
412 418Right-handed alpha
Helix 22
AC4
A
421 434Right-handed alpha
Helix 23
AC5
A
435 448Right-handed alpha
Helix 24
AC6
A
452 478Right-handed alpha
Helix 25
AC7
A
483 487Right-handed 310
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There are no sheets in PDB entry 9AYB
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