Analysis of interatomic Contacts of Structural Units in PDB entry:
9AZR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9AZR entry

There are 3 chains in PDB entry 9AZR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
E
 ALA 52GLY 263
H
 GLN 1LYS 227
L
 GLN 1GLU 212
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 9AZR. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
E
60 67Right-handed alpha
Helix 2
AA2
E
101 109Right-handed alpha
Helix 3
AA3
E
187 196Right-handed alpha
Helix 4
AA4
H
28 32Right-handed 310
Helix 5
AA5
H
87 91Right-handed 310
Helix 6
AA6
H
105 109Right-handed 310
Helix 7
AA7
H
169 171Right-handed 310
Helix 8
AA8
H
214 217Right-handed 310
Helix 9
AA9
L
26 30Right-handed 310
Helix 10
AB1
L
78 82Right-handed 310
Helix 11
AB2
L
123 129Right-handed alpha
Helix 12
AB3
L
183 190Right-handed alpha
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There are 16 sheets in PDB entry 9AZR. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
114 119first strand
Strand 2
E
256 261anti-parallel
Strand 3
E
175 184anti-parallel
Strand 4
E
251 254anti-parallel
Strand 5
E
151 153anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
114 119first strand
Strand 2
E
256 261anti-parallel
Strand 3
E
175 184anti-parallel
Strand 4
E
229 237anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
136 141first strand
Strand 2
E
144 146anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
164 169first strand
Strand 2
E
242 247anti-parallel
Strand 3
E
202 205anti-parallel
Strand 4
E
210 213anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
3 6first strand
Strand 2
H
22 25anti-parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
10 12first strand
Strand 2
H
120 124parallel
Strand 3
H
92 98anti-parallel
Strand 4
H
34 39anti-parallel
Strand 5
H
45 51anti-parallel
Strand 6
H
58 60anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
18 20first strand
Strand 2
H
78 83anti-parallel
Strand 3
H
68 73anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
133 137first strand
Strand 2
H
148 158anti-parallel
Strand 3
H
189 198anti-parallel
Strand 4
H
176 178anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
144 145first strand
Strand 2
H
148 158anti-parallel
Strand 3
H
189 198anti-parallel
Strand 4
H
182 183anti-parallel
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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
164 167first strand
Strand 2
H
208 213anti-parallel
Strand 3
H
218 223anti-parallel
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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
9 12first strand
Strand 2
L
103 107parallel
Strand 3
L
83 90anti-parallel
Strand 4
L
33 37anti-parallel
Strand 5
L
44 47anti-parallel
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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
9 12first strand
Strand 2
L
103 107parallel
Strand 3
L
83 90anti-parallel
Strand 4
L
97 99anti-parallel
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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
18 23first strand
Strand 2
L
69 74anti-parallel
Strand 3
L
61 66anti-parallel
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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
116 120first strand
Strand 2
L
132 141anti-parallel
Strand 3
L
174 182anti-parallel
Strand 4
L
161 163anti-parallel
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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
116 120first strand
Strand 2
L
132 141anti-parallel
Strand 3
L
174 182anti-parallel
Strand 4
L
167 168anti-parallel
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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
156 157first strand
Strand 2
L
147 152anti-parallel
Strand 3
L
193 199anti-parallel
Strand 4
L
202 208anti-parallel
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