Analysis of interatomic Contacts of Structural Units in PDB entry:
9AZZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9AZZ entry

There are 3 chains in PDB entry 9AZZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 5GLU 178
B
 ALA 3ASP 171
C
 ILE 5GLU 178
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 9AZZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
5 19Right-handed alpha
Helix 2
AA2
A
90 94Right-handed 310
Helix 3
AA3
A
95 101Right-handed alpha
Helix 4
AA4
A
164 168Right-handed 310
Helix 5
AA5
A
174 178Right-handed 310
Helix 6
AA6
B
4 19Right-handed alpha
Helix 7
AA7
B
86 94Right-handed alpha
Helix 8
AA8
B
164 168Right-handed 310
Helix 9
AA9
C
6 20Right-handed alpha
Helix 10
AB1
C
88 94Right-handed 310
Helix 11
AB2
C
164 168Right-handed 310
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There are 3 sheets in PDB entry 9AZZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 11 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
78 83first strand
Strand 2
A
68 73anti-parallel
Strand 3
A
60 65anti-parallel
Strand 4
A
49 54anti-parallel
Strand 5
A
38 45anti-parallel
Strand 6
A
22 31anti-parallel
Strand 7
A
149 159anti-parallel
Strand 8
A
137 144anti-parallel
Strand 9
A
125 132anti-parallel
Strand 10
A
113 120anti-parallel
Strand 11
A
104 110anti-parallel
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There are 11 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
78 83first strand
Strand 2
B
68 73anti-parallel
Strand 3
B
60 65anti-parallel
Strand 4
B
49 54anti-parallel
Strand 5
B
37 45anti-parallel
Strand 6
B
22 31anti-parallel
Strand 7
B
149 159anti-parallel
Strand 8
B
137 144anti-parallel
Strand 9
B
125 132anti-parallel
Strand 10
B
113 120anti-parallel
Strand 11
B
102 110anti-parallel
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There are 11 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
78 83first strand
Strand 2
C
68 73anti-parallel
Strand 3
C
60 65anti-parallel
Strand 4
C
49 54anti-parallel
Strand 5
C
38 45anti-parallel
Strand 6
C
22 31anti-parallel
Strand 7
C
149 159anti-parallel
Strand 8
C
137 144anti-parallel
Strand 9
C
125 132anti-parallel
Strand 10
C
113 120anti-parallel
Strand 11
C
103 110anti-parallel
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