Analysis of interatomic Contacts of Structural Units in PDB entry:
9B15


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9B15 entry

There are 2 chains in PDB entry 9B15 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1SER 683
B
 MET 1TRP 596
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 82 helices in PDB entry 9B15. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
3 7Right-handed 310
Helix 2
AA2
A
11 21Right-handed alpha
Helix 3
AA3
A
27 38Right-handed alpha
Helix 4
AA4
A
48 51Right-handed 310
Helix 5
AA5
A
52 67Right-handed alpha
Helix 6
AA6
A
77 89Right-handed alpha
Helix 7
AA7
A
90 95Right-handed 310
Helix 8
AA8
A
109 115Right-handed 310
Helix 9
AA9
A
122 131Right-handed alpha
Helix 10
AB1
A
135 139Right-handed 310
Helix 11
AB2
A
146 152Right-handed 310
Helix 12
AB3
A
155 170Right-handed alpha
Helix 13
AB4
A
184 192Right-handed alpha
Helix 14
AB5
A
230 240Right-handed alpha
Helix 15
AB6
A
251 267Right-handed alpha
Helix 16
AB7
A
272 280Right-handed alpha
Helix 17
AB8
A
285 297Right-handed alpha
Helix 18
AB9
A
307 320Right-handed alpha
Helix 19
AC1
A
356 365Right-handed alpha
Helix 20
AC2
A
383 385Right-handed 310
Helix 21
AC3
A
386 394Right-handed alpha
Helix 22
AC4
A
408 422Right-handed alpha
Helix 23
AC5
A
427 437Right-handed alpha
Helix 24
AC6
A
438 445Right-handed alpha
Helix 25
AC7
A
448 462Right-handed alpha
Helix 26
AC8
A
474 484Right-handed alpha
Helix 27
AC9
A
486 498Right-handed alpha
Helix 28
AD1
A
503 514Right-handed alpha
Helix 29
AD2
A
526 536Right-handed alpha
Helix 30
AD3
A
537 540Right-handed 310
Helix 31
AD4
A
548 569Right-handed alpha
Helix 32
AD5
A
572 581Right-handed alpha
Helix 33
AD6
A
583 609Right-handed alpha
Helix 34
AD7
A
615 623Right-handed alpha
Helix 35
AD8
A
625 627Right-handed 310
Helix 36
AD9
A
628 634Right-handed alpha
Helix 37
AE1
A
638 648Right-handed alpha
Helix 38
AE2
A
652 659Right-handed alpha
Helix 39
AE3
A
659 668Right-handed alpha
Helix 40
AE4
A
668 683Right-handed alpha
Helix 41
AE5
B
3 5Right-handed 310
Helix 42
AE6
B
6 11Right-handed alpha
Helix 43
AE7
B
11 21Right-handed alpha
Helix 44
AE8
B
27 38Right-handed alpha
Helix 45
AE9
B
48 51Right-handed 310
Helix 46
AF1
B
52 66Right-handed alpha
Helix 47
AF2
B
77 89Right-handed alpha
Helix 48
AF3
B
90 95Right-handed 310
Helix 49
AF4
B
109 115Right-handed 310
Helix 50
AF5
B
122 131Right-handed alpha
Helix 51
AF6
B
135 139Right-handed 310
Helix 52
AF7
B
146 152Right-handed 310
Helix 53
AF8
B
155 170Right-handed alpha
Helix 54
AF9
B
184 192Right-handed alpha
Helix 55
AG1
B
220 224Right-handed 310
Helix 56
AG2
B
230 241Right-handed alpha
Helix 57
AG3
B
251 267Right-handed alpha
Helix 58
AG4
B
272 280Right-handed alpha
Helix 59
AG5
B
285 297Right-handed alpha
Helix 60
AG6
B
307 320Right-handed alpha
Helix 61
AG7
B
356 365Right-handed alpha
Helix 62
AG8
B
383 385Right-handed 310
Helix 63
AG9
B
386 393Right-handed alpha
Helix 64
AH1
B
408 422Right-handed alpha
Helix 65
AH2
B
427 436Right-handed alpha
Helix 66
AH3
B
438 445Right-handed alpha
Helix 67
AH4
B
448 462Right-handed alpha
Helix 68
AH5
B
474 484Right-handed alpha
Helix 69
AH6
B
486 500Right-handed alpha
Helix 70
AH7
B
503 513Right-handed alpha
Helix 71
AH8
B
526 536Right-handed alpha
Helix 72
AH9
B
537 540Right-handed 310
Helix 73
AI1
B
548 569Right-handed alpha
Helix 74
AI2
B
572 581Right-handed alpha
Helix 75
AI3
B
583 609Right-handed alpha
Helix 76
AI4
B
615 623Right-handed alpha
Helix 77
AI5
B
625 627Right-handed 310
Helix 78
AI6
B
628 633Right-handed alpha
Helix 79
AI7
B
638 648Right-handed alpha
Helix 80
AI8
B
652 659Right-handed alpha
Helix 81
AI9
B
659 668Right-handed alpha
Helix 82
AJ1
B
668 681Right-handed alpha
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There are 7 sheets in PDB entry 9B15. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
98 100first strand
Strand 2
A
117 121parallel
Strand 3
A
71 75parallel
Strand 4
A
141 144parallel
Strand 5
A
174 179parallel
Strand 6
A
43 46parallel
Strand 7
A
195 198parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
223 228first strand
Strand 2
A
215 220anti-parallel
Strand 3
A
206 212anti-parallel
Strand 4
A
376 381parallel
Strand 5
A
342 346parallel
Strand 6
A
245 249parallel
Strand 7
A
325 328parallel
Strand 8
A
299 302parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
465 467first strand
Strand 2
A
471 473anti-parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
98 100first strand
Strand 2
B
117 121parallel
Strand 3
B
71 75parallel
Strand 4
B
141 144parallel
Strand 5
B
174 179parallel
Strand 6
B
43 46parallel
Strand 7
B
195 198parallel
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There are 8 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
225 228first strand
Strand 2
B
215 219anti-parallel
Strand 3
B
206 212anti-parallel
Strand 4
B
376 381parallel
Strand 5
B
342 346parallel
Strand 6
B
245 249parallel
Strand 7
B
325 328parallel
Strand 8
B
299 302parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
349 350first strand
Strand 2
B
353 354anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
465 467first strand
Strand 2
B
471 473anti-parallel
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