Analysis of interatomic Contacts of Structural Units in PDB entry:
9B1M


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9B1M entry

There is 1 chain in PDB entry 9B1M (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 3LEU 517
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 34 helices in PDB entry 9B1M. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
3 11Right-handed alpha
Helix 2
AA2
A
14 37Right-handed alpha
Helix 3
AA3
A
38 40Right-handed 310
Helix 4
AA4
A
51 56Right-handed alpha
Helix 5
AA5
A
65 74Right-handed alpha
Helix 6
AA6
A
92 97Right-handed 310
Helix 7
AA7
A
101 105Right-handed 310
Helix 8
AA8
A
106 108Right-handed 310
Helix 9
AA9
A
127 133Right-handed alpha
Helix 10
AB1
A
135 139Right-handed 310
Helix 11
AB2
A
140 168Right-handed alpha
Helix 12
AB3
A
168 189Right-handed alpha
Helix 13
AB4
A
192 220Right-handed alpha
Helix 14
AB5
A
221 222Right-handed 310
Helix 15
AB6
A
223 225Right-handed 310
Helix 16
AB7
A
226 252Right-handed alpha
Helix 17
AB8
A
254 262Right-handed alpha
Helix 18
AB9
A
264 273Right-handed alpha
Helix 19
AC1
A
279 286Right-handed alpha
Helix 20
AC2
A
288 303Right-handed alpha
Helix 21
AC3
A
306 311Right-handed 310
Helix 22
AC4
A
312 320Right-handed alpha
Helix 23
AC5
A
320 325Right-handed alpha
Helix 24
AC6
A
326 329Right-handed 310
Helix 25
AC7
A
333 339Right-handed alpha
Helix 26
AC8
A
342 364Right-handed alpha
Helix 27
AC9
A
366 371Right-handed alpha
Helix 28
AD1
A
373 384Right-handed alpha
Helix 29
AD2
A
384 399Right-handed alpha
Helix 30
AD3
A
400 419Right-handed alpha
Helix 31
AD4
A
426 453Right-handed alpha
Helix 32
AD5
A
460 482Right-handed alpha
Helix 33
AD6
A
483 489Right-handed 310
Helix 34
AD7
A
490 509Right-handed alpha
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There are 2 sheets in PDB entry 9B1M. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
47 49first strand
Strand 2
A
117 119anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
86 88first strand
Strand 2
A
110 112anti-parallel
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