Analysis of interatomic Contacts of Structural Units in PDB entry:
9B2Z


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9B2Z entry

There are 2 chains in PDB entry 9B2Z (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 23GLN 373
B
 ILE 5PHE 375
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 41 helices in PDB entry 9B2Z. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
23 32Right-handed alpha
Helix 2
AA2
A
38 54Right-handed alpha
Helix 3
AA3
A
63 73Right-handed alpha
Helix 4
AA4
A
75 89Right-handed alpha
Helix 5
AA5
A
90 94Right-handed 310
Helix 6
AA6
A
95 106Right-handed alpha
Helix 7
AA7
A
107 109Right-handed 310
Helix 8
AA8
A
112 115Right-handed 310
Helix 9
AA9
A
116 135Right-handed alpha
Helix 10
AB1
A
140 154Right-handed alpha
Helix 11
AB2
A
167 177Right-handed alpha
Helix 12
AB3
A
178 182Right-handed 310
Helix 13
AB4
A
186 193Right-handed alpha
Helix 14
AB5
A
246 251Right-handed alpha
Helix 15
AB6
A
263 279Right-handed alpha
Helix 16
AB7
A
283 301Right-handed alpha
Helix 17
AB8
A
306 315Right-handed alpha
Helix 18
AB9
A
316 326Right-handed alpha
Helix 19
AC1
A
338 373Right-handed alpha
Helix 20
AC2
B
55 60Right-handed alpha
Helix 21
AC3
B
61 65Right-handed 310
Helix 22
AC4
B
78 92Right-handed alpha
Helix 23
AC5
B
97 101Right-handed 310
Helix 24
AC6
B
112 126Right-handed alpha
Helix 25
AC7
B
137 145Right-handed alpha
Helix 26
AC8
B
181 195Right-handed alpha
Helix 27
AC9
B
202 217Right-handed alpha
Helix 28
AD1
B
222 233Right-handed alpha
Helix 29
AD2
B
252 257Right-handed alpha
Helix 30
AD3
B
258 262Right-handed 310
Helix 31
AD4
B
263 268Right-handed 310
Helix 32
AD5
B
273 284Right-handed alpha
Helix 33
AD6
B
286 289Right-handed 310
Helix 34
AD7
B
290 295Right-handed alpha
Helix 35
AD8
B
301 305Right-handed 310
Helix 36
AD9
B
308 321Right-handed alpha
Helix 37
AE1
B
334 336Right-handed 310
Helix 38
AE2
B
337 347Right-handed alpha
Helix 39
AE3
B
350 355Right-handed 310
Helix 40
AE4
B
359 366Right-handed alpha
Helix 41
AE5
B
368 374Right-handed alpha
Back to top of page

There are 6 sheets in PDB entry 9B2Z. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
208 211first strand
Strand 2
A
232 235anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
29 32first strand
Strand 2
B
16 21anti-parallel
Strand 3
B
8 11anti-parallel
Strand 4
B
103 107parallel
Strand 5
B
131 136parallel
Strand 6
B
357 358anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
35 36first strand
Strand 2
B
53 54anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
71 72first strand
Strand 2
B
75 76anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
169 170first strand
Strand 2
B
160 166anti-parallel
Strand 3
B
150 155anti-parallel
Strand 4
B
297 300parallel
Strand 5
B
329 330parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
238 241first strand
Strand 2
B
247 250anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il