Analysis of interatomic Contacts of Structural Units in PDB entry:
9B31


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9B31 entry

There are 5 chains in PDB entry 9B31 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LEU 1004
B
 SER 17GLY 99
C
 LYS 37SER 126
D
 ASP 81LEU 365
E
 GLY 83LEU 365
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 85 helices in PDB entry 9B31. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2 12Right-handed alpha
Helix 2
AA2
A
14 32Right-handed alpha
Helix 3
AA3
A
32 47Right-handed alpha
Helix 4
AA4
A
50 69Right-handed alpha
Helix 5
AA5
A
83 100Right-handed alpha
Helix 6
AA6
A
104 123Right-handed alpha
Helix 7
AA7
A
129 140Right-handed alpha
Helix 8
AA8
A
143 158Right-handed alpha
Helix 9
AA9
A
159 165Right-handed alpha
Helix 10
AB1
A
167 182Right-handed alpha
Helix 11
AB2
A
186 206Right-handed alpha
Helix 12
AB3
A
212 235Right-handed alpha
Helix 13
AB4
A
242 264Right-handed alpha
Helix 14
AB5
A
270 292Right-handed alpha
Helix 15
AB6
A
303 321Right-handed alpha
Helix 16
AB7
A
327 342Right-handed alpha
Helix 17
AB8
A
345 355Right-handed alpha
Helix 18
AB9
A
355 364Right-handed alpha
Helix 19
AC1
A
371 383Right-handed alpha
Helix 20
AC2
A
384 402Right-handed alpha
Helix 21
AC3
A
405 421Right-handed alpha
Helix 22
AC4
A
430 448Right-handed alpha
Helix 23
AC5
A
452 470Right-handed alpha
Helix 24
AC6
A
476 493Right-handed alpha
Helix 25
AC7
A
497 515Right-handed alpha
Helix 26
AC8
A
516 542Right-handed alpha
Helix 27
AC9
A
545 562Right-handed alpha
Helix 28
AD1
A
570 588Right-handed alpha
Helix 29
AD2
A
591 606Right-handed alpha
Helix 30
AD3
A
610 635Right-handed alpha
Helix 31
AD4
A
640 656Right-handed alpha
Helix 32
AD5
A
664 682Right-handed alpha
Helix 33
AD6
A
684 702Right-handed alpha
Helix 34
AD7
A
703 708Right-handed alpha
Helix 35
AD8
A
710 723Right-handed alpha
Helix 36
AD9
A
733 745Right-handed alpha
Helix 37
AE1
A
745 750Right-handed alpha
Helix 38
AE2
A
752 767Right-handed alpha
Helix 39
AE3
A
769 787Right-handed alpha
Helix 40
AE4
A
787 798Right-handed alpha
Helix 41
AE5
A
805 818Right-handed alpha
Helix 42
AE6
A
822 840Right-handed alpha
Helix 43
AE7
A
841 846Right-handed alpha
Helix 44
AE8
A
863 868Right-handed alpha
Helix 45
AE9
A
879 895Right-handed alpha
Helix 46
AF1
A
932 942Right-handed alpha
Helix 47
AF2
A
964 980Right-handed alpha
Helix 48
AF3
A
980 991Right-handed alpha
Helix 49
AF4
A
992 1004Right-handed alpha
Helix 50
AF5
B
18 23Right-handed alpha
Helix 51
AF6
B
27 38Right-handed alpha
Helix 52
AF7
B
46 74Right-handed alpha
Helix 53
AF8
B
80 90Right-handed alpha
Helix 54
AF9
B
91 99Right-handed alpha
Helix 55
AG1
C
38 52Right-handed alpha
Helix 56
AG2
C
58 87Right-handed alpha
Helix 57
AG3
C
93 105Right-handed alpha
Helix 58
AG4
C
106 124Right-handed alpha
Helix 59
AG5
D
82 88Right-handed alpha
Helix 60
AG6
D
89 140Right-handed alpha
Helix 61
AG7
D
146 159Right-handed alpha
Helix 62
AG8
D
162 166Right-handed 310
Helix 63
AG9
D
168 174Right-handed alpha
Helix 64
AH1
D
175 180Right-handed alpha
Helix 65
AH2
D
187 196Right-handed alpha
Helix 66
AH3
D
196 201Right-handed alpha
Helix 67
AH4
D
204 212Right-handed alpha
Helix 68
AH5
D
311 316Right-handed 310
Helix 69
AH6
D
322 329Right-handed alpha
Helix 70
AH7
D
329 352Right-handed alpha
Helix 71
AH8
D
355 362Right-handed alpha
Helix 72
AH9
E
84 88Right-handed alpha
Helix 73
AI1
E
89 141Right-handed alpha
Helix 74
AI2
E
146 161Right-handed alpha
Helix 75
AI3
E
162 166Right-handed 310
Helix 76
AI4
E
168 173Right-handed alpha
Helix 77
AI5
E
175 180Right-handed alpha
Helix 78
AI6
E
187 195Right-handed alpha
Helix 79
AI7
E
198 203Right-handed alpha
Helix 80
AI8
E
204 212Right-handed alpha
Helix 81
AI9
E
259 263Right-handed 310
Helix 82
AJ1
E
311 316Right-handed 310
Helix 83
AJ2
E
324 326Right-handed 310
Helix 84
AJ3
E
327 351Right-handed alpha
Helix 85
AJ4
E
356 362Right-handed alpha
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There are 8 sheets in PDB entry 9B31. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
799 800first strand
Strand 2
A
803 804anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
848 853first strand
Strand 2
A
874 878anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
43 44first strand
Strand 2
C
91 92parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
78 79first strand
Strand 2
C
56 57parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
216 221first strand
Strand 2
D
228 234anti-parallel
Strand 3
D
247 258anti-parallel
Strand 4
D
264 271anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
285 291first strand
Strand 2
D
302 308anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
214 222first strand
Strand 2
E
228 235anti-parallel
Strand 3
E
247 254anti-parallel
Strand 4
E
266 271anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
285 293first strand
Strand 2
E
300 308anti-parallel
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