Analysis of interatomic Contacts of Structural Units in PDB entry:
9B34


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9B34 entry

There are 2 chains in PDB entry 9B34 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
E
 ALA 1ASN 237
F
 ALA 1ASN 237
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There is 1 helix in PDB entry 9B34. Click on helix number for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
E
14 18Right-handed 310
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There are 10 sheets in PDB entry 9B34. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
5 6first strand
Strand 2
E
210 216anti-parallel
Strand 3
E
88 96anti-parallel
Strand 4
E
170 174anti-parallel
Strand 5
E
143 144anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
5 6first strand
Strand 2
E
210 216anti-parallel
Strand 3
E
88 96anti-parallel
Strand 4
E
179 180anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
9 10first strand
Strand 2
E
24 25anti-parallel
Strand 3
E
38 39anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
49 54first strand
Strand 2
E
60 66anti-parallel
Strand 3
E
77 78anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
154 155first strand
Strand 2
E
105 106anti-parallel
Strand 3
E
197 198anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
128 130first strand
Strand 2
E
109 112anti-parallel
Strand 3
E
192 194anti-parallel
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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
36 39first strand
Strand 2
F
24 29anti-parallel
Strand 3
F
5 8anti-parallel
Strand 4
F
210 216anti-parallel
Strand 5
F
88 97anti-parallel
Strand 6
F
169 175anti-parallel
Strand 7
F
140 141anti-parallel
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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
36 39first strand
Strand 2
F
24 29anti-parallel
Strand 3
F
5 8anti-parallel
Strand 4
F
210 216anti-parallel
Strand 5
F
88 97anti-parallel
Strand 6
F
179 180anti-parallel
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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
77 78first strand
Strand 2
F
60 66anti-parallel
Strand 3
F
49 54anti-parallel
Strand 4
F
192 198anti-parallel
Strand 5
F
105 112anti-parallel
Strand 6
F
128 130anti-parallel
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There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
77 78first strand
Strand 2
F
60 66anti-parallel
Strand 3
F
49 54anti-parallel
Strand 4
F
192 198anti-parallel
Strand 5
F
105 112anti-parallel
Strand 6
F
154 155anti-parallel
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