Analysis of interatomic Contacts of Structural Units in PDB entry:
9B3F


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9B3F entry

There are 5 chains in PDB entry 9B3F (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
D
 ASP 81LEU 365
E
 GLY 83LEU 365
A
 ASN 4LEU 1004
B
 SER 17GLY 99
C
 LYS 37SER 126
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 89 helices in PDB entry 9B3F. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
D
81 88Right-handed alpha
Helix 2
AA2
D
89 140Right-handed alpha
Helix 3
AA3
D
146 159Right-handed alpha
Helix 4
AA4
D
162 166Right-handed 310
Helix 5
AA5
D
168 173Right-handed alpha
Helix 6
AA6
D
175 180Right-handed alpha
Helix 7
AA7
D
187 195Right-handed alpha
Helix 8
AA8
D
196 201Right-handed alpha
Helix 9
AA9
D
204 212Right-handed alpha
Helix 10
AB1
D
311 316Right-handed 310
Helix 11
AB2
D
322 352Right-handed alpha
Helix 12
AB3
D
355 361Right-handed alpha
Helix 13
AB4
E
84 88Right-handed alpha
Helix 14
AB5
E
89 140Right-handed alpha
Helix 15
AB6
E
146 161Right-handed alpha
Helix 16
AB7
E
162 166Right-handed 310
Helix 17
AB8
E
168 173Right-handed alpha
Helix 18
AB9
E
175 180Right-handed alpha
Helix 19
AC1
E
187 196Right-handed alpha
Helix 20
AC2
E
198 203Right-handed alpha
Helix 21
AC3
E
204 212Right-handed alpha
Helix 22
AC4
E
259 263Right-handed 310
Helix 23
AC5
E
311 316Right-handed 310
Helix 24
AC6
E
324 326Right-handed 310
Helix 25
AC7
E
327 351Right-handed alpha
Helix 26
AC8
E
356 362Right-handed alpha
Helix 27
AC9
A
5 11Right-handed alpha
Helix 28
AD1
A
17 29Right-handed alpha
Helix 29
AD2
A
30 46Right-handed alpha
Helix 30
AD3
A
50 66Right-handed alpha
Helix 31
AD4
A
83 100Right-handed alpha
Helix 32
AD5
A
104 122Right-handed alpha
Helix 33
AD6
A
127 141Right-handed alpha
Helix 34
AD7
A
143 157Right-handed alpha
Helix 35
AD8
A
159 165Right-handed alpha
Helix 36
AD9
A
167 182Right-handed alpha
Helix 37
AE1
A
186 207Right-handed alpha
Helix 38
AE2
A
212 236Right-handed alpha
Helix 39
AE3
A
242 264Right-handed alpha
Helix 40
AE4
A
270 291Right-handed alpha
Helix 41
AE5
A
303 321Right-handed alpha
Helix 42
AE6
A
327 343Right-handed alpha
Helix 43
AE7
A
345 355Right-handed alpha
Helix 44
AE8
A
355 364Right-handed alpha
Helix 45
AE9
A
371 382Right-handed alpha
Helix 46
AF1
A
384 403Right-handed alpha
Helix 47
AF2
A
404 407Right-handed 310
Helix 48
AF3
A
408 421Right-handed alpha
Helix 49
AF4
A
430 448Right-handed alpha
Helix 50
AF5
A
452 470Right-handed alpha
Helix 51
AF6
A
476 495Right-handed alpha
Helix 52
AF7
A
497 515Right-handed alpha
Helix 53
AF8
A
516 522Right-handed alpha
Helix 54
AF9
A
522 541Right-handed alpha
Helix 55
AG1
A
542 544Right-handed 310
Helix 56
AG2
A
545 563Right-handed alpha
Helix 57
AG3
A
570 588Right-handed alpha
Helix 58
AG4
A
591 607Right-handed alpha
Helix 59
AG5
A
611 614Right-handed 310
Helix 60
AG6
A
615 621Right-handed alpha
Helix 61
AG7
A
621 635Right-handed alpha
Helix 62
AG8
A
640 657Right-handed alpha
Helix 63
AG9
A
664 682Right-handed alpha
Helix 64
AH1
A
684 702Right-handed alpha
Helix 65
AH2
A
703 708Right-handed alpha
Helix 66
AH3
A
710 723Right-handed alpha
Helix 67
AH4
A
727 733Right-handed alpha
Helix 68
AH5
A
733 745Right-handed alpha
Helix 69
AH6
A
749 767Right-handed alpha
Helix 70
AH7
A
769 787Right-handed alpha
Helix 71
AH8
A
787 798Right-handed alpha
Helix 72
AH9
A
805 818Right-handed alpha
Helix 73
AI1
A
822 840Right-handed alpha
Helix 74
AI2
A
841 847Right-handed alpha
Helix 75
AI3
A
863 868Right-handed alpha
Helix 76
AI4
A
879 895Right-handed alpha
Helix 77
AI5
A
932 942Right-handed alpha
Helix 78
AI6
A
964 980Right-handed alpha
Helix 79
AI7
A
980 991Right-handed alpha
Helix 80
AI8
A
992 1004Right-handed alpha
Helix 81
AI9
B
18 23Right-handed alpha
Helix 82
AJ1
B
27 39Right-handed alpha
Helix 83
AJ2
B
46 74Right-handed alpha
Helix 84
AJ3
B
80 91Right-handed alpha
Helix 85
AJ4
B
91 99Right-handed alpha
Helix 86
AJ5
C
40 52Right-handed alpha
Helix 87
AJ6
C
58 87Right-handed alpha
Helix 88
AJ7
C
93 105Right-handed alpha
Helix 89
AJ8
C
106 126Right-handed alpha
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There are 8 sheets in PDB entry 9B3F. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
216 221first strand
Strand 2
D
228 234anti-parallel
Strand 3
D
247 254anti-parallel
Strand 4
D
266 271anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
285 294first strand
Strand 2
D
299 308anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
214 222first strand
Strand 2
E
228 235anti-parallel
Strand 3
E
247 254anti-parallel
Strand 4
E
266 271anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
285 293first strand
Strand 2
E
300 308anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
799 800first strand
Strand 2
A
803 804anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
848 849first strand
Strand 2
A
877 878anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
853 854first strand
Strand 2
A
873 874anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
78 79first strand
Strand 2
C
56 57parallel
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