Analysis of interatomic Contacts of Structural Units in PDB entry:
9B3H


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9B3H entry

There are 2 chains in PDB entry 9B3H (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 48ILE 600
B
 SER 103GLN 318
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 9B3H. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
51 56Right-handed alpha
Helix 2
AA2
A
84 88Right-handed 310
Helix 3
AA3
A
105 116Right-handed alpha
Helix 4
AA4
A
167 178Right-handed alpha
Helix 5
AA5
A
210 214Right-handed 310
Helix 6
AA6
A
239 241Right-handed 310
Helix 7
AA7
A
255 257Right-handed 310
Helix 8
AA8
A
267 271Right-handed 310
Helix 9
AA9
A
290 294Right-handed 310
Helix 10
AB1
A
304 308Right-handed 310
Helix 11
AB2
A
328 338Right-handed alpha
Helix 12
AB3
A
396 400Right-handed 310
Helix 13
AB4
A
401 406Right-handed 310
Helix 14
AB5
A
492 496Right-handed 310
Helix 15
AB6
A
582 591Right-handed alpha
Helix 16
AB7
A
591 596Right-handed alpha
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There are 13 sheets in PDB entry 9B3H. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
73 76first strand
Strand 2
A
79 82anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
102 103first strand
Strand 2
A
95 97anti-parallel
Strand 3
A
121 124anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
134 138first strand
Strand 2
A
145 151anti-parallel
Strand 3
A
159 160anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
134 138first strand
Strand 2
A
145 151anti-parallel
Strand 3
A
226 231anti-parallel
Strand 4
A
184 190anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
198 203first strand
Strand 2
A
215 220anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
243 245first strand
Strand 2
A
251 253anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
281 282first strand
Strand 2
A
288 289anti-parallel
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There are 7 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
372 377first strand
Strand 2
A
380 389anti-parallel
Strand 3
A
392 395anti-parallel
Strand 4
A
448 452anti-parallel
Strand 5
A
425 434anti-parallel
Strand 6
A
408 412anti-parallel
Strand 7
A
372 377anti-parallel
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There are 7 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
483 488first strand
Strand 2
A
502 508anti-parallel
Strand 3
A
525 529anti-parallel
Strand 4
A
574 578anti-parallel
Strand 5
A
555 563anti-parallel
Strand 6
A
545 549anti-parallel
Strand 7
A
483 488anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
109 116first strand
Strand 2
B
129 136anti-parallel
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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
141 143first strand
Strand 2
B
152 158anti-parallel
Strand 3
B
161 168anti-parallel
Strand 4
B
176 183anti-parallel
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There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
228 235first strand
Strand 2
B
218 225anti-parallel
Strand 3
B
198 208anti-parallel
Strand 4
B
308 318anti-parallel
Strand 5
B
298 304anti-parallel
Strand 6
B
286 288anti-parallel
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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
243 248first strand
Strand 2
B
251 259anti-parallel
Strand 3
B
281 284anti-parallel
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