Analysis of interatomic Contacts of Structural Units in PDB entry:
9B3I


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9B3I entry

There are 6 chains in PDB entry 9B3I (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 2LEU 1004
B
 SER 17GLY 99
C
 GLU 38SER 126
D
 VAL 10VAL 179
E
 GLY 83LEU 365
F
 ASP 81LEU 365
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 98 helices in PDB entry 9B3I. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2 10Right-handed alpha
Helix 2
AA2
A
14 32Right-handed alpha
Helix 3
AA3
A
32 46Right-handed alpha
Helix 4
AA4
A
50 69Right-handed alpha
Helix 5
AA5
A
83 99Right-handed alpha
Helix 6
AA6
A
104 123Right-handed alpha
Helix 7
AA7
A
128 142Right-handed alpha
Helix 8
AA8
A
143 157Right-handed alpha
Helix 9
AA9
A
159 165Right-handed alpha
Helix 10
AB1
A
167 182Right-handed alpha
Helix 11
AB2
A
186 206Right-handed alpha
Helix 12
AB3
A
212 234Right-handed alpha
Helix 13
AB4
A
242 264Right-handed alpha
Helix 14
AB5
A
265 269Right-handed 310
Helix 15
AB6
A
270 295Right-handed alpha
Helix 16
AB7
A
296 298Right-handed 310
Helix 17
AB8
A
301 321Right-handed alpha
Helix 18
AB9
A
327 342Right-handed alpha
Helix 19
AC1
A
345 355Right-handed alpha
Helix 20
AC2
A
355 364Right-handed alpha
Helix 21
AC3
A
371 383Right-handed alpha
Helix 22
AC4
A
384 402Right-handed alpha
Helix 23
AC5
A
407 421Right-handed alpha
Helix 24
AC6
A
430 448Right-handed alpha
Helix 25
AC7
A
452 470Right-handed alpha
Helix 26
AC8
A
476 495Right-handed alpha
Helix 27
AC9
A
497 515Right-handed alpha
Helix 28
AD1
A
516 522Right-handed alpha
Helix 29
AD2
A
522 542Right-handed alpha
Helix 30
AD3
A
543 544Right-handed 310
Helix 31
AD4
A
545 546Right-handed 310
Helix 32
AD5
A
547 561Right-handed alpha
Helix 33
AD6
A
565 569Right-handed 310
Helix 34
AD7
A
570 588Right-handed alpha
Helix 35
AD8
A
591 606Right-handed alpha
Helix 36
AD9
A
607 609Right-handed 310
Helix 37
AE1
A
613 634Right-handed alpha
Helix 38
AE2
A
640 657Right-handed alpha
Helix 39
AE3
A
664 680Right-handed alpha
Helix 40
AE4
A
684 702Right-handed alpha
Helix 41
AE5
A
703 708Right-handed alpha
Helix 42
AE6
A
710 723Right-handed alpha
Helix 43
AE7
A
727 732Right-handed alpha
Helix 44
AE8
A
733 745Right-handed alpha
Helix 45
AE9
A
749 751Right-handed 310
Helix 46
AF1
A
752 767Right-handed alpha
Helix 47
AF2
A
769 787Right-handed alpha
Helix 48
AF3
A
787 798Right-handed alpha
Helix 49
AF4
A
805 817Right-handed alpha
Helix 50
AF5
A
822 840Right-handed alpha
Helix 51
AF6
A
841 847Right-handed alpha
Helix 52
AF7
A
863 868Right-handed alpha
Helix 53
AF8
A
878 894Right-handed alpha
Helix 54
AF9
A
935 941Right-handed alpha
Helix 55
AG1
A
964 980Right-handed alpha
Helix 56
AG2
A
980 991Right-handed alpha
Helix 57
AG3
A
992 1004Right-handed alpha
Helix 58
AG4
B
18 22Right-handed alpha
Helix 59
AG5
B
27 39Right-handed alpha
Helix 60
AG6
B
46 74Right-handed alpha
Helix 61
AG7
B
80 90Right-handed alpha
Helix 62
AG8
B
91 99Right-handed alpha
Helix 63
AG9
C
40 52Right-handed alpha
Helix 64
AH1
C
58 87Right-handed alpha
Helix 65
AH2
C
93 105Right-handed alpha
Helix 66
AH3
C
106 126Right-handed alpha
Helix 67
AH4
D
24 35Right-handed alpha
Helix 68
AH5
D
78 82Right-handed 310
Helix 69
AH6
D
96 102Right-handed alpha
Helix 70
AH7
D
102 114Right-handed alpha
Helix 71
AH8
D
139 145Right-handed alpha
Helix 72
AH9
D
160 172Right-handed alpha
Helix 73
AI1
E
84 88Right-handed alpha
Helix 74
AI2
E
89 140Right-handed alpha
Helix 75
AI3
E
146 161Right-handed alpha
Helix 76
AI4
E
162 166Right-handed 310
Helix 77
AI5
E
168 173Right-handed alpha
Helix 78
AI6
E
175 180Right-handed alpha
Helix 79
AI7
E
187 196Right-handed alpha
Helix 80
AI8
E
198 203Right-handed alpha
Helix 81
AI9
E
204 212Right-handed alpha
Helix 82
AJ1
E
259 263Right-handed 310
Helix 83
AJ2
E
311 316Right-handed 310
Helix 84
AJ3
E
324 326Right-handed 310
Helix 85
AJ4
E
327 351Right-handed alpha
Helix 86
AJ5
E
356 362Right-handed alpha
Helix 87
AJ6
F
82 88Right-handed alpha
Helix 88
AJ7
F
89 140Right-handed alpha
Helix 89
AJ8
F
146 159Right-handed alpha
Helix 90
AJ9
F
162 166Right-handed 310
Helix 91
AK1
F
168 173Right-handed alpha
Helix 92
AK2
F
175 180Right-handed alpha
Helix 93
AK3
F
187 195Right-handed alpha
Helix 94
AK4
F
196 201Right-handed alpha
Helix 95
AK5
F
204 212Right-handed alpha
Helix 96
AK6
F
311 316Right-handed 310
Helix 97
AK7
F
322 352Right-handed alpha
Helix 98
AK8
F
355 362Right-handed alpha
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There are 9 sheets in PDB entry 9B3I. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
799 800first strand
Strand 2
A
803 804anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
852 854first strand
Strand 2
A
873 875anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
43 44first strand
Strand 2
C
91 92parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
78 79first strand
Strand 2
C
56 57parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
47 56first strand
Strand 2
D
59 68anti-parallel
Strand 3
D
12 19parallel
Strand 4
D
87 93parallel
Strand 5
D
119 124parallel
Strand 6
D
147 150parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
214 222first strand
Strand 2
E
228 235anti-parallel
Strand 3
E
247 254anti-parallel
Strand 4
E
266 271anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
285 293first strand
Strand 2
E
300 308anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
216 221first strand
Strand 2
F
228 234anti-parallel
Strand 3
F
247 254anti-parallel
Strand 4
F
266 271anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
285 294first strand
Strand 2
F
299 308anti-parallel
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