Analysis of interatomic Contacts of Structural Units in PDB entry:
9B3U


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9B3U entry

There are 4 chains in PDB entry 9B3U (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 74LEU 719
B
 ARG 74LEU 719
C
 ARG 74LEU 719
D
 ARG 74LEU 719
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are136 helices in PDB entry 9B3U. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
76 84Right-handed alpha
Helix 2
AA2
A
89 93Right-handed 310
Helix 3
AA3
A
94 102Right-handed alpha
Helix 4
AA4
A
108 112Right-handed 310
Helix 5
AA5
A
119 126Right-handed alpha
Helix 6
AA6
A
135 146Right-handed alpha
Helix 7
AA7
A
151 155Right-handed 310
Helix 8
AA8
A
166 174Right-handed alpha
Helix 9
AA9
A
176 186Right-handed alpha
Helix 10
AB1
A
196 200Right-handed 310
Helix 11
AB2
A
212 220Right-handed alpha
Helix 12
AB3
A
222 232Right-handed alpha
Helix 13
AB4
A
248 257Right-handed alpha
Helix 14
AB5
A
260 282Right-handed alpha
Helix 15
AB6
A
286 290Right-handed 310
Helix 16
AB7
A
297 305Right-handed alpha
Helix 17
AB8
A
307 316Right-handed alpha
Helix 18
AB9
A
320 327Right-handed 310
Helix 19
AC1
A
355 363Right-handed alpha
Helix 20
AC2
A
368 373Right-handed alpha
Helix 21
AC3
A
377 388Right-handed alpha
Helix 22
AC4
A
389 413Right-handed alpha
Helix 23
AC5
A
430 459Right-handed alpha
Helix 24
AC6
A
462 467Right-handed alpha
Helix 25
AC7
A
471 492Right-handed alpha
Helix 26
AC8
A
496 512Right-handed alpha
Helix 27
AC9
A
513 518Right-handed 310
Helix 28
AD1
A
519 529Right-handed alpha
Helix 29
AD2
A
533 559Right-handed alpha
Helix 30
AD3
A
592 603Right-handed alpha
Helix 31
AD4
A
604 606Right-handed 310
Helix 32
AD5
A
618 649Right-handed alpha
Helix 33
AD6
A
655 672Right-handed alpha
Helix 34
AD7
A
711 717Right-handed alpha
Helix 35
AD8
B
76 84Right-handed alpha
Helix 36
AD9
B
89 93Right-handed 310
Helix 37
AE1
B
94 102Right-handed alpha
Helix 38
AE2
B
108 112Right-handed 310
Helix 39
AE3
B
119 126Right-handed alpha
Helix 40
AE4
B
135 146Right-handed alpha
Helix 41
AE5
B
151 155Right-handed 310
Helix 42
AE6
B
166 174Right-handed alpha
Helix 43
AE7
B
176 186Right-handed alpha
Helix 44
AE8
B
196 200Right-handed 310
Helix 45
AE9
B
212 220Right-handed alpha
Helix 46
AF1
B
222 232Right-handed alpha
Helix 47
AF2
B
248 257Right-handed alpha
Helix 48
AF3
B
260 282Right-handed alpha
Helix 49
AF4
B
286 290Right-handed 310
Helix 50
AF5
B
297 305Right-handed alpha
Helix 51
AF6
B
307 316Right-handed alpha
Helix 52
AF7
B
320 327Right-handed 310
Helix 53
AF8
B
355 363Right-handed alpha
Helix 54
AF9
B
368 373Right-handed alpha
Helix 55
AG1
B
377 388Right-handed alpha
Helix 56
AG2
B
389 413Right-handed alpha
Helix 57
AG3
B
430 459Right-handed alpha
Helix 58
AG4
B
462 467Right-handed alpha
Helix 59
AG5
B
471 492Right-handed alpha
Helix 60
AG6
B
496 512Right-handed alpha
Helix 61
AG7
B
513 518Right-handed 310
Helix 62
AG8
B
519 529Right-handed alpha
Helix 63
AG9
B
533 559Right-handed alpha
Helix 64
AH1
B
592 603Right-handed alpha
Helix 65
AH2
B
604 606Right-handed 310
Helix 66
AH3
B
618 649Right-handed alpha
Helix 67
AH4
B
655 672Right-handed alpha
Helix 68
AH5
B
711 717Right-handed alpha
Helix 69
AH6
C
76 84Right-handed alpha
Helix 70
AH7
C
89 93Right-handed 310
Helix 71
AH8
C
94 102Right-handed alpha
Helix 72
AH9
C
108 112Right-handed 310
Helix 73
AI1
C
119 126Right-handed alpha
Helix 74
AI2
C
135 146Right-handed alpha
Helix 75
AI3
C
151 155Right-handed 310
Helix 76
AI4
C
166 174Right-handed alpha
Helix 77
AI5
C
176 186Right-handed alpha
Helix 78
AI6
C
196 200Right-handed 310
Helix 79
AI7
C
212 220Right-handed alpha
Helix 80
AI8
C
222 232Right-handed alpha
Helix 81
AI9
C
248 257Right-handed alpha
Helix 82
AJ1
C
260 282Right-handed alpha
Helix 83
AJ2
C
286 290Right-handed 310
Helix 84
AJ3
C
297 305Right-handed alpha
Helix 85
AJ4
C
307 316Right-handed alpha
Helix 86
AJ5
C
320 327Right-handed 310
Helix 87
AJ6
C
355 363Right-handed alpha
Helix 88
AJ7
C
368 373Right-handed alpha
Helix 89
AJ8
C
377 388Right-handed alpha
Helix 90
AJ9
C
389 413Right-handed alpha
Helix 91
AK1
C
430 459Right-handed alpha
Helix 92
AK2
C
462 467Right-handed alpha
Helix 93
AK3
C
471 492Right-handed alpha
Helix 94
AK4
C
496 512Right-handed alpha
Helix 95
AK5
C
513 518Right-handed 310
Helix 96
AK6
C
519 529Right-handed alpha
Helix 97
AK7
C
533 559Right-handed alpha
Helix 98
AK8
C
592 603Right-handed alpha
Helix 99
AK9
C
604 606Right-handed 310
Helix 100
AL1
C
618 649Right-handed alpha
Helix 101
AL2
C
655 672Right-handed alpha
Helix 102
AL3
C
711 717Right-handed alpha
Helix 103
AL4
D
76 84Right-handed alpha
Helix 104
AL5
D
89 93Right-handed 310
Helix 105
AL6
D
94 102Right-handed alpha
Helix 106
AL7
D
108 112Right-handed 310
Helix 107
AL8
D
119 126Right-handed alpha
Helix 108
AL9
D
135 146Right-handed alpha
Helix 109
AM1
D
151 155Right-handed 310
Helix 110
AM2
D
166 174Right-handed alpha
Helix 111
AM3
D
176 186Right-handed alpha
Helix 112
AM4
D
196 200Right-handed 310
Helix 113
AM5
D
212 220Right-handed alpha
Helix 114
AM6
D
222 232Right-handed alpha
Helix 115
AM7
D
248 257Right-handed alpha
Helix 116
AM8
D
260 282Right-handed alpha
Helix 117
AM9
D
286 290Right-handed 310
Helix 118
AN1
D
297 305Right-handed alpha
Helix 119
AN2
D
307 316Right-handed alpha
Helix 120
AN3
D
320 327Right-handed 310
Helix 121
AN4
D
355 363Right-handed alpha
Helix 122
AN5
D
368 373Right-handed alpha
Helix 123
AN6
D
377 388Right-handed alpha
Helix 124
AN7
D
389 413Right-handed alpha
Helix 125
AN8
D
430 459Right-handed alpha
Helix 126
AN9
D
462 467Right-handed alpha
Helix 127
AO1
D
471 492Right-handed alpha
Helix 128
AO2
D
496 512Right-handed alpha
Helix 129
AO3
D
513 518Right-handed 310
Helix 130
AO4
D
519 529Right-handed alpha
Helix 131
AO5
D
533 559Right-handed alpha
Helix 132
AO6
D
592 603Right-handed alpha
Helix 133
AO7
D
604 606Right-handed 310
Helix 134
AO8
D
618 649Right-handed alpha
Helix 135
AO9
D
655 672Right-handed alpha
Helix 136
AP1
D
711 717Right-handed alpha
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There are 4 sheets in PDB entry 9B3U. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
329 335first strand
Strand 2
A
338 344anti-parallel
Strand 3
A
700 710anti-parallel
Strand 4
A
687 692anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
329 335first strand
Strand 2
B
338 344anti-parallel
Strand 3
B
700 710anti-parallel
Strand 4
B
687 692anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
329 335first strand
Strand 2
C
338 344anti-parallel
Strand 3
C
700 710anti-parallel
Strand 4
C
687 692anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
329 335first strand
Strand 2
D
338 344anti-parallel
Strand 3
D
700 710anti-parallel
Strand 4
D
687 692anti-parallel
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