Analysis of interatomic Contacts of Structural Units in PDB entry:
9B43


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9B43 entry

There is 1 chain in PDB entry 9B43 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 21PRO 949
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 9B43. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
25 33Right-handed alpha
Helix 2
AA2
A
33 51Right-handed alpha
Helix 3
AA3
A
54 62Right-handed alpha
Helix 4
AA4
A
71 84Right-handed alpha
Helix 5
AA5
A
106 120Right-handed alpha
Helix 6
AA6
A
138 142Right-handed 310
Helix 7
AA7
A
161 178Right-handed alpha
Helix 8
AA8
A
190 226Right-handed alpha
Helix 9
AA9
A
227 255Right-handed alpha
Helix 10
AB1
A
261 294Right-handed alpha
Helix 11
AB2
A
296 325Right-handed alpha
Helix 12
AB3
A
326 329Right-handed 310
Helix 13
AB4
A
331 365Right-handed alpha
Helix 14
AB5
A
377 391Right-handed alpha
Helix 15
AB6
A
396 405Right-handed alpha
Helix 16
AB7
A
406 410Right-handed 310
Helix 17
AB8
A
419 423Right-handed 310
Helix 18
AB9
A
427 440Right-handed alpha
Helix 19
AC1
A
460 476Right-handed alpha
Helix 20
AC2
A
694 699Right-handed 310
Helix 21
AC3
A
700 711Right-handed alpha
Helix 22
AC4
A
730 748Right-handed alpha
Helix 23
AC5
A
762 772Right-handed alpha
Helix 24
AC6
A
773 798Right-handed alpha
Helix 25
AC7
A
799 828Right-handed alpha
Helix 26
AC8
A
836 863Right-handed alpha
Helix 27
AC9
A
864 866Right-handed 310
Helix 28
AD1
A
867 896Right-handed alpha
Helix 29
AD2
A
897 900Right-handed 310
Helix 30
AD3
A
902 922Right-handed alpha
Helix 31
AD4
A
922 936Right-handed alpha
Helix 32
AD5
A
937 940Right-handed 310
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There are 3 sheets in PDB entry 9B43. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
125 129first strand
Strand 2
A
148 155anti-parallel
Strand 3
A
91 99anti-parallel
Strand 4
A
184 189anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
415 416first strand
Strand 2
A
833 834parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
480 484first strand
Strand 2
A
717 724anti-parallel
Strand 3
A
448 453anti-parallel
Strand 4
A
757 761anti-parallel
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