Analysis of interatomic Contacts of Structural Units in PDB entry:
9B69


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9B69 entry

There are 4 chains in PDB entry 9B69 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
C
 ASN 10THR 383
A
 ASN 10THR 383
B
 ASN 10THR 383
D
 ASN 10ILE 221
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 44 helices in PDB entry 9B69. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
C
23 36Right-handed alpha
Helix 2
AA2
C
54 69Right-handed alpha
Helix 3
AA3
C
81 93Right-handed alpha
Helix 4
AA4
C
117 129Right-handed alpha
Helix 5
AA5
C
143 157Right-handed alpha
Helix 6
AA6
C
172 187Right-handed alpha
Helix 7
AA7
C
197 212Right-handed alpha
Helix 8
AA8
C
252 265Right-handed alpha
Helix 9
AA9
C
279 302Right-handed alpha
Helix 10
AB1
C
324 334Right-handed alpha
Helix 11
AB2
A
22 37Right-handed alpha
Helix 12
AB3
A
54 69Right-handed alpha
Helix 13
AB4
A
81 93Right-handed alpha
Helix 14
AB5
A
117 128Right-handed alpha
Helix 15
AB6
A
143 157Right-handed alpha
Helix 16
AB7
A
174 187Right-handed alpha
Helix 17
AB8
A
197 212Right-handed alpha
Helix 18
AB9
A
232 236Right-handed 310
Helix 19
AC1
A
252 264Right-handed alpha
Helix 20
AC2
A
279 302Right-handed alpha
Helix 21
AC3
A
323 334Right-handed alpha
Helix 22
AC4
B
22 37Right-handed alpha
Helix 23
AC5
B
54 69Right-handed alpha
Helix 24
AC6
B
81 93Right-handed alpha
Helix 25
AC7
B
117 129Right-handed alpha
Helix 26
AC8
B
143 157Right-handed alpha
Helix 27
AC9
B
169 173Right-handed 310
Helix 28
AD1
B
174 187Right-handed alpha
Helix 29
AD2
B
197 211Right-handed alpha
Helix 30
AD3
B
232 237Right-handed alpha
Helix 31
AD4
B
252 263Right-handed alpha
Helix 32
AD5
B
279 301Right-handed alpha
Helix 33
AD6
B
325 334Right-handed alpha
Helix 34
AD7
D
22 36Right-handed alpha
Helix 35
AD8
D
54 68Right-handed alpha
Helix 36
AD9
D
81 93Right-handed alpha
Helix 37
AE1
D
117 129Right-handed alpha
Helix 38
AE2
D
143 157Right-handed alpha
Helix 39
AE3
D
172 187Right-handed alpha
Helix 40
AE4
D
197 212Right-handed alpha
Helix 41
AE5
D
231 235Right-handed 310
Helix 42
AE6
D
252 264Right-handed alpha
Helix 43
AE7
D
279 303Right-handed alpha
Helix 44
AE8
D
325 335Right-handed alpha
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There are 12 sheets in PDB entry 9B69. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
42 50first strand
Strand 2
C
11 19parallel
Strand 3
C
72 74parallel
Strand 4
C
95 98parallel
Strand 5
C
110 112parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
159 164first strand
Strand 2
C
132 137parallel
Strand 3
C
191 195parallel
Strand 4
C
219 222parallel
Strand 5
C
241 246parallel
Strand 6
C
358 363anti-parallel
Strand 7
C
368 374anti-parallel
Strand 8
C
381 382anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
337 340first strand
Strand 2
C
343 346anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
44 49first strand
Strand 2
A
13 18parallel
Strand 3
A
72 75parallel
Strand 4
A
95 98parallel
Strand 5
A
110 112parallel
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There are 8 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
161 164first strand
Strand 2
A
134 137parallel
Strand 3
A
191 195parallel
Strand 4
A
219 222parallel
Strand 5
A
241 246parallel
Strand 6
A
358 364anti-parallel
Strand 7
A
367 374anti-parallel
Strand 8
A
381 382anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
337 340first strand
Strand 2
A
343 347anti-parallel
Strand 3
A
353 354anti-parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
42 47first strand
Strand 2
B
11 17parallel
Strand 3
B
72 75parallel
Strand 4
B
95 98parallel
Strand 5
B
110 112parallel
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There are 8 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
159 164first strand
Strand 2
B
132 137parallel
Strand 3
B
191 195parallel
Strand 4
B
219 222parallel
Strand 5
B
241 246parallel
Strand 6
B
358 364anti-parallel
Strand 7
B
367 374anti-parallel
Strand 8
B
381 382anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
337 340first strand
Strand 2
B
343 346anti-parallel
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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
43 49first strand
Strand 2
D
12 18parallel
Strand 3
D
72 75parallel
Strand 4
D
95 98parallel
Strand 5
D
111 112parallel
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There are 8 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
159 164first strand
Strand 2
D
132 137parallel
Strand 3
D
191 195parallel
Strand 4
D
219 222parallel
Strand 5
D
241 246parallel
Strand 6
D
357 364anti-parallel
Strand 7
D
367 375anti-parallel
Strand 8
D
381 382anti-parallel
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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
337 339first strand
Strand 2
D
344 346anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il