Analysis of interatomic Contacts of Structural Units in PDB entry:
9B6C


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9B6C entry

There are 2 chains in PDB entry 9B6C (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 CYS 1LYS 539
B
 CYS 1LYS 539
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 44 helices in PDB entry 9B6C. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
16 22Right-handed alpha
Helix 2
AA2
A
80 85Right-handed alpha
Helix 3
AA3
A
97 114Right-handed alpha
Helix 4
AA4
A
159 163Right-handed 310
Helix 5
AA5
A
226 247Right-handed alpha
Helix 6
AA6
A
259 276Right-handed alpha
Helix 7
AA7
A
292 306Right-handed alpha
Helix 8
AA8
A
315 331Right-handed alpha
Helix 9
AA9
A
334 355Right-handed alpha
Helix 10
AB1
A
373 379Right-handed 310
Helix 11
AB2
A
381 395Right-handed alpha
Helix 12
AB3
A
396 398Right-handed 310
Helix 13
AB4
A
400 410Right-handed alpha
Helix 14
AB5
A
417 420Right-handed 310
Helix 15
AB6
A
421 430Right-handed alpha
Helix 16
AB7
A
432 437Right-handed alpha
Helix 17
AB8
A
444 450Right-handed alpha
Helix 18
AB9
A
458 463Right-handed alpha
Helix 19
AC1
A
480 492Right-handed alpha
Helix 20
AC2
A
493 504Right-handed alpha
Helix 21
AC3
A
511 525Right-handed alpha
Helix 22
AC4
B
16 21Right-handed alpha
Helix 23
AC5
B
22 24Right-handed 310
Helix 24
AC6
B
84 88Right-handed alpha
Helix 25
AC7
B
97 114Right-handed alpha
Helix 26
AC8
B
226 247Right-handed alpha
Helix 27
AC9
B
259 276Right-handed alpha
Helix 28
AD1
B
292 306Right-handed alpha
Helix 29
AD2
B
315 322Right-handed alpha
Helix 30
AD3
B
322 331Right-handed alpha
Helix 31
AD4
B
334 355Right-handed alpha
Helix 32
AD5
B
365 370Right-handed alpha
Helix 33
AD6
B
373 379Right-handed 310
Helix 34
AD7
B
381 395Right-handed alpha
Helix 35
AD8
B
400 407Right-handed alpha
Helix 36
AD9
B
408 412Right-handed 310
Helix 37
AE1
B
421 430Right-handed alpha
Helix 38
AE2
B
432 437Right-handed alpha
Helix 39
AE3
B
444 451Right-handed alpha
Helix 40
AE4
B
458 463Right-handed alpha
Helix 41
AE5
B
480 488Right-handed alpha
Helix 42
AE6
B
493 499Right-handed alpha
Helix 43
AE7
B
499 504Right-handed alpha
Helix 44
AE8
B
511 525Right-handed alpha
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There are 6 sheets in PDB entry 9B6C. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 12 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
175 178first strand
Strand 2
A
145 148anti-parallel
Strand 3
A
154 157anti-parallel
Strand 4
A
2 5anti-parallel
Strand 5
A
44 48anti-parallel
Strand 6
A
30 34anti-parallel
Strand 7
B
30 35anti-parallel
Strand 8
B
43 48anti-parallel
Strand 9
B
2 7anti-parallel
Strand 10
B
154 157anti-parallel
Strand 11
B
145 148anti-parallel
Strand 12
B
175 178anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
69 77first strand
Strand 2
A
118 126anti-parallel
Strand 3
A
131 136anti-parallel
Strand 4
A
183 189anti-parallel
Strand 5
A
195 202anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
308 313first strand
Strand 2
A
283 288parallel
Strand 3
A
252 255parallel
Strand 4
A
359 361parallel
Strand 5
A
414 416parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
61 63first strand
Strand 2
B
66 73anti-parallel
Strand 3
B
121 126anti-parallel
Strand 4
B
131 136anti-parallel
Strand 5
B
183 188anti-parallel
Strand 6
B
199 202anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
76 77first strand
Strand 2
B
118 119anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
308 313first strand
Strand 2
B
283 288parallel
Strand 3
B
252 255parallel
Strand 4
B
359 361parallel
Strand 5
B
414 416parallel
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