Analysis of interatomic Contacts of Structural Units in PDB entry:
9B77


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9B77 entry

There are 4 chains in PDB entry 9B77 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 2THR 319
B
 PHE 2THR 319
C
 PHE 2THR 319
D
 PHE 2THR 319
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 44 helices in PDB entry 9B77. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
22 36Right-handed alpha
Helix 2
AA2
A
53 64Right-handed alpha
Helix 3
AA3
A
79 89Right-handed alpha
Helix 4
AA4
A
106 108Right-handed 310
Helix 5
AA5
A
109 118Right-handed alpha
Helix 6
AA6
A
134 153Right-handed alpha
Helix 7
AA7
A
168 175Right-handed alpha
Helix 8
AA8
A
183 192Right-handed alpha
Helix 9
AA9
A
213 229Right-handed alpha
Helix 10
AB1
A
230 262Right-handed alpha
Helix 11
AB2
A
267 304Right-handed alpha
Helix 12
AB3
B
22 36Right-handed alpha
Helix 13
AB4
B
53 64Right-handed alpha
Helix 14
AB5
B
79 89Right-handed alpha
Helix 15
AB6
B
106 108Right-handed 310
Helix 16
AB7
B
109 118Right-handed alpha
Helix 17
AB8
B
134 153Right-handed alpha
Helix 18
AB9
B
168 175Right-handed alpha
Helix 19
AC1
B
183 192Right-handed alpha
Helix 20
AC2
B
213 229Right-handed alpha
Helix 21
AC3
B
230 262Right-handed alpha
Helix 22
AC4
B
267 304Right-handed alpha
Helix 23
AC5
C
22 36Right-handed alpha
Helix 24
AC6
C
53 64Right-handed alpha
Helix 25
AC7
C
79 89Right-handed alpha
Helix 26
AC8
C
106 108Right-handed 310
Helix 27
AC9
C
109 118Right-handed alpha
Helix 28
AD1
C
134 153Right-handed alpha
Helix 29
AD2
C
168 175Right-handed alpha
Helix 30
AD3
C
183 192Right-handed alpha
Helix 31
AD4
C
213 229Right-handed alpha
Helix 32
AD5
C
230 262Right-handed alpha
Helix 33
AD6
C
267 304Right-handed alpha
Helix 34
AD7
D
22 36Right-handed alpha
Helix 35
AD8
D
53 64Right-handed alpha
Helix 36
AD9
D
79 89Right-handed alpha
Helix 37
AE1
D
106 108Right-handed 310
Helix 38
AE2
D
109 118Right-handed alpha
Helix 39
AE3
D
134 153Right-handed alpha
Helix 40
AE4
D
168 175Right-handed alpha
Helix 41
AE5
D
183 192Right-handed alpha
Helix 42
AE6
D
213 229Right-handed alpha
Helix 43
AE7
D
230 262Right-handed alpha
Helix 44
AE8
D
267 304Right-handed alpha
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There are 4 sheets in PDB entry 9B77. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
195 200first strand
Strand 2
A
123 128parallel
Strand 3
A
164 167anti-parallel
Strand 4
A
95 98anti-parallel
Strand 5
A
9 16parallel
Strand 6
A
40 47parallel
Strand 7
A
69 74parallel
Strand 8
B
310 314anti-parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
310 314first strand
Strand 2
D
69 74anti-parallel
Strand 3
D
40 47parallel
Strand 4
D
9 16parallel
Strand 5
D
95 98parallel
Strand 6
D
164 167anti-parallel
Strand 7
D
123 128anti-parallel
Strand 8
D
195 200parallel
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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
195 200first strand
Strand 2
B
123 128parallel
Strand 3
B
164 167anti-parallel
Strand 4
B
95 98anti-parallel
Strand 5
B
9 16parallel
Strand 6
B
40 47parallel
Strand 7
B
69 74parallel
Strand 8
C
310 314anti-parallel
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There are 8 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
195 200first strand
Strand 2
C
123 128parallel
Strand 3
C
164 167anti-parallel
Strand 4
C
95 98anti-parallel
Strand 5
C
9 16parallel
Strand 6
C
40 47parallel
Strand 7
C
69 74parallel
Strand 8
D
310 314anti-parallel
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