Analysis of interatomic Contacts of Structural Units in PDB entry:
9B7G

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9B7G entry

There are 9 chains in PDB entry 9B7G (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	VAL 26	ASP 441
H	VAL 11	SER 113
L	SER 2	THR 105
B	VAL 26	ASP 441
J	VAL 11	SER 113
K	SER 2	THR 105
C	VAL 26	ASP 441
Q	VAL 11	SER 113
P	SER 2	THR 105

There are 21 helices in PDB entry 9B7G. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	65	72	Right-handed alpha
Helix 2	AA2	A	73	80	Right-handed 310
Helix 3	AA3	A	104	116	Right-handed alpha
Helix 4	AA4	A	187	196	Right-handed alpha
Helix 5	AA5	A	404	441	Right-handed alpha
Helix 6	AA6	H	60	64	Right-handed 310
Helix 7	AA7	H	83	87	Right-handed 310
Helix 8	AA8	B	65	72	Right-handed alpha
Helix 9	AA9	B	73	80	Right-handed 310
Helix 10	AB1	B	104	116	Right-handed alpha
Helix 11	AB2	B	187	196	Right-handed alpha
Helix 12	AB3	B	404	441	Right-handed alpha
Helix 13	AB4	J	60	64	Right-handed 310
Helix 14	AB5	J	83	87	Right-handed 310
Helix 15	AB6	C	65	72	Right-handed alpha
Helix 16	AB7	C	73	80	Right-handed 310
Helix 17	AB8	C	104	116	Right-handed alpha
Helix 18	AB9	C	187	196	Right-handed alpha
Helix 19	AC1	C	404	441	Right-handed alpha
Helix 20	AC2	Q	60	64	Right-handed 310
Helix 21	AC3	Q	83	87	Right-handed 310

There are 42 sheets in PDB entry 9B7G. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	40	41	first strand
Strand 2	A	315	316	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	43	44	first strand
Strand 2	A	294	295	parallel
Strand 3	A	307	308	parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	58	60	first strand
Strand 2	A	86	89	parallel
Strand 3	A	266	269	parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	120	122	first strand
Strand 2	A	256	259	anti-parallel
Strand 3	A	176	184	anti-parallel
Strand 4	A	251	254	anti-parallel
Strand 5	A	151	153	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	120	122	first strand
Strand 2	A	256	259	anti-parallel
Strand 3	A	176	184	anti-parallel
Strand 4	A	229	237	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	136	140	first strand
Strand 2	A	145	146	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	164	169	first strand
Strand 2	A	242	247	anti-parallel
Strand 3	A	202	206	anti-parallel
Strand 4	A	209	213	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	281	282	first strand
Strand 2	A	302	303	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	17	23	first strand
Strand 2	H	77	82	anti-parallel
Strand 3	H	67	72	anti-parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	54	58	first strand
Strand 2	H	45	52	anti-parallel
Strand 3	H	34	39	anti-parallel
Strand 4	H	88	96	anti-parallel
Strand 5	H	100	102	anti-parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	54	58	first strand
Strand 2	H	45	52	anti-parallel
Strand 3	H	34	39	anti-parallel
Strand 4	H	88	96	anti-parallel
Strand 5	H	107	109	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	19	24	first strand
Strand 2	L	70	75	anti-parallel
Strand 3	L	62	67	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	45	48	first strand
Strand 2	L	34	38	anti-parallel
Strand 3	L	85	92	anti-parallel
Strand 4	L	95	98	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	45	48	first strand
Strand 2	L	34	38	anti-parallel
Strand 3	L	85	92	anti-parallel
Strand 4	L	102	103	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	40	41	first strand
Strand 2	B	315	316	anti-parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	43	44	first strand
Strand 2	B	294	295	parallel
Strand 3	B	307	308	parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	58	60	first strand
Strand 2	B	86	89	parallel
Strand 3	B	266	269	parallel

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There are 5 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	120	122	first strand
Strand 2	B	256	259	anti-parallel
Strand 3	B	176	184	anti-parallel
Strand 4	B	251	254	anti-parallel
Strand 5	B	151	153	anti-parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	120	122	first strand
Strand 2	B	256	259	anti-parallel
Strand 3	B	176	184	anti-parallel
Strand 4	B	229	237	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	136	140	first strand
Strand 2	B	145	146	anti-parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	164	169	first strand
Strand 2	B	242	247	anti-parallel
Strand 3	B	202	206	anti-parallel
Strand 4	B	209	213	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	281	282	first strand
Strand 2	B	302	303	anti-parallel

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There are 3 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	17	23	first strand
Strand 2	J	77	82	anti-parallel
Strand 3	J	67	72	anti-parallel

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There are 5 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	54	58	first strand
Strand 2	J	45	52	anti-parallel
Strand 3	J	34	39	anti-parallel
Strand 4	J	88	96	anti-parallel
Strand 5	J	100	102	anti-parallel

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There are 5 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	54	58	first strand
Strand 2	J	45	52	anti-parallel
Strand 3	J	34	39	anti-parallel
Strand 4	J	88	96	anti-parallel
Strand 5	J	107	109	anti-parallel

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There are 3 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	19	24	first strand
Strand 2	K	70	75	anti-parallel
Strand 3	K	62	67	anti-parallel

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There are 4 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	45	48	first strand
Strand 2	K	34	38	anti-parallel
Strand 3	K	85	92	anti-parallel
Strand 4	K	95	98	anti-parallel

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There are 4 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	45	48	first strand
Strand 2	K	34	38	anti-parallel
Strand 3	K	85	92	anti-parallel
Strand 4	K	102	103	anti-parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	40	41	first strand
Strand 2	C	315	316	anti-parallel

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There are 3 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	43	44	first strand
Strand 2	C	294	295	parallel
Strand 3	C	307	308	parallel

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There are 3 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	58	60	first strand
Strand 2	C	86	89	parallel
Strand 3	C	266	269	parallel

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There are 5 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	120	122	first strand
Strand 2	C	256	259	anti-parallel
Strand 3	C	176	184	anti-parallel
Strand 4	C	251	254	anti-parallel
Strand 5	C	151	153	anti-parallel

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There are 4 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	120	122	first strand
Strand 2	C	256	259	anti-parallel
Strand 3	C	176	184	anti-parallel
Strand 4	C	229	237	anti-parallel

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There are 2 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	136	140	first strand
Strand 2	C	145	146	anti-parallel

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There are 4 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	164	169	first strand
Strand 2	C	242	247	anti-parallel
Strand 3	C	202	206	anti-parallel
Strand 4	C	209	213	anti-parallel

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There are 2 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	281	282	first strand
Strand 2	C	302	303	anti-parallel

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There are 3 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	17	23	first strand
Strand 2	Q	77	82	anti-parallel
Strand 3	Q	67	72	anti-parallel

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There are 5 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	54	58	first strand
Strand 2	Q	45	52	anti-parallel
Strand 3	Q	34	39	anti-parallel
Strand 4	Q	88	96	anti-parallel
Strand 5	Q	100	102	anti-parallel

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There are 5 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	54	58	first strand
Strand 2	Q	45	52	anti-parallel
Strand 3	Q	34	39	anti-parallel
Strand 4	Q	88	96	anti-parallel
Strand 5	Q	107	109	anti-parallel

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There are 3 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	19	24	first strand
Strand 2	P	70	75	anti-parallel
Strand 3	P	62	67	anti-parallel

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There are 4 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	45	48	first strand
Strand 2	P	34	38	anti-parallel
Strand 3	P	85	92	anti-parallel
Strand 4	P	95	98	anti-parallel

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There are 4 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	45	48	first strand
Strand 2	P	34	38	anti-parallel
Strand 3	P	85	92	anti-parallel
Strand 4	P	102	103	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9B7G

Analysis of interatomic Contacts of Structural Units in PDB entry:
9B7G