Analysis of interatomic Contacts of Structural Units in PDB entry:
9B8A


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9B8A entry

There is 1 chain in PDB entry 9B8A (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 602TRP 1157
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 9B8A. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
602 615Right-handed alpha
Helix 2
AA2
A
619 633Right-handed alpha
Helix 3
AA3
A
636 650Right-handed alpha
Helix 4
AA4
A
652 661Right-handed alpha
Helix 5
AA5
A
670 684Right-handed alpha
Helix 6
AA6
A
686 704Right-handed alpha
Helix 7
AA7
A
707 725Right-handed alpha
Helix 8
AA8
A
726 741Right-handed alpha
Helix 9
AA9
A
750 757Right-handed alpha
Helix 10
AB1
A
765 782Right-handed alpha
Helix 11
AB2
A
921 926Right-handed alpha
Helix 12
AB3
A
1069 1073Right-handed 310
Helix 13
AB4
A
1077 1082Right-handed alpha
Helix 14
AB5
A
1153 1157Right-handed 310
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There are 3 sheets in PDB entry 9B8A. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 18 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
928 929first strand
Strand 2
A
938 953anti-parallel
Strand 3
A
959 973anti-parallel
Strand 4
A
975 994anti-parallel
Strand 5
A
997 1010anti-parallel
Strand 6
A
1029 1042anti-parallel
Strand 7
A
1046 1061anti-parallel
Strand 8
A
1089 1107anti-parallel
Strand 9
A
1110 1120anti-parallel
Strand 10
A
1127 1136anti-parallel
Strand 11
A
785 795anti-parallel
Strand 12
A
804 817anti-parallel
Strand 13
A
820 835anti-parallel
Strand 14
A
861 874anti-parallel
Strand 15
A
878 884anti-parallel
Strand 16
A
894 904anti-parallel
Strand 17
A
907 917anti-parallel
Strand 18
A
938 953anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
848 849first strand
Strand 2
A
1017 1018parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1064 1065first strand
Strand 2
A
1085 1086anti-parallel
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