Analysis of interatomic Contacts of Structural Units in PDB entry:
9B8D


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9B8D entry

There is 1 chain in PDB entry 9B8D (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 58ILE 283
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 9B8D. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
65 83Right-handed alpha
Helix 2
AA2
A
86 104Right-handed alpha
Helix 3
AA3
A
115 117Right-handed 310
Helix 4
AA4
A
118 135Right-handed alpha
Helix 5
AA5
A
139 155Right-handed alpha
Helix 6
AA6
A
158 174Right-handed alpha
Helix 7
AA7
A
218 226Right-handed alpha
Helix 8
AA8
A
227 230Right-handed 310
Helix 9
AA9
A
258 264Right-handed alpha
Helix 10
AB1
A
264 274Right-handed alpha
Helix 11
AB2
A
275 280Right-handed 310
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There is 1 sheet (AA1) in PDB entry 9B8D.

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
209 212first strand
Strand 2
A
201 204anti-parallel
Strand 3
A
192 197anti-parallel
Strand 4
A
184 189anti-parallel
Strand 5
A
232 238anti-parallel
Strand 6
A
244 246anti-parallel
Strand 7
A
256 257anti-parallel
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