Analysis of interatomic Contacts of Structural Units in PDB entry:
9B8Z


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9B8Z entry

There is 1 chain in PDB entry 9B8Z (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 7LEU 1172
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 48 helices in PDB entry 9B8Z. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
10 15Right-handed alpha
Helix 2
AA2
A
98 109Right-handed alpha
Helix 3
AA3
A
131 150Right-handed alpha
Helix 4
AA4
A
160 177Right-handed alpha
Helix 5
AA5
A
196 201Right-handed 310
Helix 6
AA6
A
246 259Right-handed alpha
Helix 7
AA7
A
264 268Right-handed 310
Helix 8
AA8
A
281 294Right-handed alpha
Helix 9
AA9
A
308 317Right-handed alpha
Helix 10
AB1
A
329 337Right-handed alpha
Helix 11
AB2
A
344 357Right-handed alpha
Helix 12
AB3
A
373 384Right-handed alpha
Helix 13
AB4
A
393 403Right-handed alpha
Helix 14
AB5
A
405 412Right-handed alpha
Helix 15
AB6
A
422 424Right-handed 310
Helix 16
AB7
A
425 435Right-handed alpha
Helix 17
AB8
A
437 447Right-handed alpha
Helix 18
AB9
A
450 455Right-handed alpha
Helix 19
AC1
A
456 466Right-handed alpha
Helix 20
AC2
A
471 480Right-handed alpha
Helix 21
AC3
A
503 512Right-handed alpha
Helix 22
AC4
A
558 570Right-handed alpha
Helix 23
AC5
A
571 581Right-handed alpha
Helix 24
AC6
A
584 603Right-handed alpha
Helix 25
AC7
A
607 634Right-handed alpha
Helix 26
AC8
A
634 644Right-handed alpha
Helix 27
AC9
A
653 662Right-handed alpha
Helix 28
AD1
A
663 668Right-handed alpha
Helix 29
AD2
A
669 681Right-handed alpha
Helix 30
AD3
A
689 699Right-handed alpha
Helix 31
AD4
A
700 705Right-handed 310
Helix 32
AD5
A
767 778Right-handed alpha
Helix 33
AD6
A
778 803Right-handed alpha
Helix 34
AD7
A
811 834Right-handed alpha
Helix 35
AD8
A
852 861Right-handed alpha
Helix 36
AD9
A
862 884Right-handed alpha
Helix 37
AE1
A
887 906Right-handed alpha
Helix 38
AE2
A
907 913Right-handed 310
Helix 39
AE3
A
916 953Right-handed alpha
Helix 40
AE4
A
958 974Right-handed alpha
Helix 41
AE5
A
979 983Right-handed 310
Helix 42
AE6
A
1016 1033Right-handed alpha
Helix 43
AE7
A
1033 1050Right-handed alpha
Helix 44
AE8
A
1053 1071Right-handed alpha
Helix 45
AE9
A
1076 1078Right-handed 310
Helix 46
AF1
A
1079 1088Right-handed alpha
Helix 47
AF2
A
1116 1142Right-handed alpha
Helix 48
AF3
A
1143 1172Right-handed alpha
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There are 4 sheets in PDB entry 9B8Z. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
16 19first strand
Strand 2
A
68 71anti-parallel
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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
76 77first strand
Strand 2
A
89 94anti-parallel
Strand 3
A
231 236parallel
Strand 4
A
184 190parallel
Strand 5
A
152 155parallel
Strand 6
A
118 122parallel
Strand 7
A
273 277parallel
Strand 8
A
298 301parallel
Strand 9
A
361 364parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
79 80first strand
Strand 2
A
210 211parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
989 991first strand
Strand 2
A
1000 1002anti-parallel
Strand 3
A
1012 1013anti-parallel
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