Analysis of interatomic Contacts of Structural Units in PDB entry:
9B93

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9B93 entry

There are 4 chains in PDB entry 9B93 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLU 7	ARG 1177
B	GLU 7	ARG 1177
C	GLU 7	ARG 1177
D	GLU 7	ARG 1177

There are196 helices in PDB entry 9B93. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	10	15	Right-handed alpha
Helix 2	AA2	A	98	108	Right-handed alpha
Helix 3	AA3	A	131	141	Right-handed alpha
Helix 4	AA4	A	141	150	Right-handed alpha
Helix 5	AA5	A	160	178	Right-handed alpha
Helix 6	AA6	A	196	201	Right-handed alpha
Helix 7	AA7	A	246	258	Right-handed alpha
Helix 8	AA8	A	264	268	Right-handed 310
Helix 9	AA9	A	281	294	Right-handed alpha
Helix 10	AB1	A	308	318	Right-handed alpha
Helix 11	AB2	A	325	337	Right-handed alpha
Helix 12	AB3	A	344	356	Right-handed alpha
Helix 13	AB4	A	357	359	Right-handed 310
Helix 14	AB5	A	372	386	Right-handed alpha
Helix 15	AB6	A	395	403	Right-handed alpha
Helix 16	AB7	A	405	415	Right-handed alpha
Helix 17	AB8	A	421	435	Right-handed alpha
Helix 18	AB9	A	437	447	Right-handed alpha
Helix 19	AC1	A	450	455	Right-handed alpha
Helix 20	AC2	A	456	465	Right-handed alpha
Helix 21	AC3	A	471	480	Right-handed alpha
Helix 22	AC4	A	502	512	Right-handed alpha
Helix 23	AC5	A	558	569	Right-handed alpha
Helix 24	AC6	A	571	582	Right-handed alpha
Helix 25	AC7	A	585	602	Right-handed alpha
Helix 26	AC8	A	605	634	Right-handed alpha
Helix 27	AC9	A	634	644	Right-handed alpha
Helix 28	AD1	A	653	661	Right-handed alpha
Helix 29	AD2	A	663	668	Right-handed alpha
Helix 30	AD3	A	669	681	Right-handed alpha
Helix 31	AD4	A	689	699	Right-handed alpha
Helix 32	AD5	A	700	705	Right-handed 310
Helix 33	AD6	A	767	778	Right-handed alpha
Helix 34	AD7	A	778	803	Right-handed alpha
Helix 35	AD8	A	811	834	Right-handed alpha
Helix 36	AD9	A	852	862	Right-handed alpha
Helix 37	AE1	A	862	884	Right-handed alpha
Helix 38	AE2	A	887	910	Right-handed alpha
Helix 39	AE3	A	916	926	Right-handed alpha
Helix 40	AE4	A	926	953	Right-handed alpha
Helix 41	AE5	A	958	967	Right-handed alpha
Helix 42	AE6	A	967	975	Right-handed alpha
Helix 43	AE7	A	979	984	Right-handed alpha
Helix 44	AE8	A	1016	1033	Right-handed alpha
Helix 45	AE9	A	1033	1072	Right-handed alpha
Helix 46	AF1	A	1076	1078	Right-handed 310
Helix 47	AF2	A	1079	1088	Right-handed alpha
Helix 48	AF3	A	1116	1143	Right-handed alpha
Helix 49	AF4	A	1143	1177	Right-handed alpha
Helix 50	AF5	B	10	15	Right-handed alpha
Helix 51	AF6	B	98	108	Right-handed alpha
Helix 52	AF7	B	131	141	Right-handed alpha
Helix 53	AF8	B	141	150	Right-handed alpha
Helix 54	AF9	B	160	178	Right-handed alpha
Helix 55	AG1	B	196	201	Right-handed alpha
Helix 56	AG2	B	246	258	Right-handed alpha
Helix 57	AG3	B	264	268	Right-handed 310
Helix 58	AG4	B	281	294	Right-handed alpha
Helix 59	AG5	B	308	318	Right-handed alpha
Helix 60	AG6	B	325	337	Right-handed alpha
Helix 61	AG7	B	344	356	Right-handed alpha
Helix 62	AG8	B	357	359	Right-handed 310
Helix 63	AG9	B	372	386	Right-handed alpha
Helix 64	AH1	B	395	403	Right-handed alpha
Helix 65	AH2	B	405	415	Right-handed alpha
Helix 66	AH3	B	421	435	Right-handed alpha
Helix 67	AH4	B	437	447	Right-handed alpha
Helix 68	AH5	B	450	455	Right-handed alpha
Helix 69	AH6	B	456	465	Right-handed alpha
Helix 70	AH7	B	471	480	Right-handed alpha
Helix 71	AH8	B	502	512	Right-handed alpha
Helix 72	AH9	B	558	569	Right-handed alpha
Helix 73	AI1	B	571	582	Right-handed alpha
Helix 74	AI2	B	585	602	Right-handed alpha
Helix 75	AI3	B	605	634	Right-handed alpha
Helix 76	AI4	B	634	644	Right-handed alpha
Helix 77	AI5	B	653	661	Right-handed alpha
Helix 78	AI6	B	663	668	Right-handed alpha
Helix 79	AI7	B	669	681	Right-handed alpha
Helix 80	AI8	B	689	699	Right-handed alpha
Helix 81	AI9	B	700	705	Right-handed 310
Helix 82	AJ1	B	767	778	Right-handed alpha
Helix 83	AJ2	B	778	803	Right-handed alpha
Helix 84	AJ3	B	811	834	Right-handed alpha
Helix 85	AJ4	B	852	862	Right-handed alpha
Helix 86	AJ5	B	862	884	Right-handed alpha
Helix 87	AJ6	B	887	910	Right-handed alpha
Helix 88	AJ7	B	916	926	Right-handed alpha
Helix 89	AJ8	B	926	953	Right-handed alpha
Helix 90	AJ9	B	958	967	Right-handed alpha
Helix 91	AK1	B	967	975	Right-handed alpha
Helix 92	AK2	B	979	984	Right-handed alpha
Helix 93	AK3	B	1016	1033	Right-handed alpha
Helix 94	AK4	B	1033	1072	Right-handed alpha
Helix 95	AK5	B	1076	1078	Right-handed 310
Helix 96	AK6	B	1079	1088	Right-handed alpha
Helix 97	AK7	B	1116	1143	Right-handed alpha
Helix 98	AK8	B	1143	1177	Right-handed alpha
Helix 99	AK9	C	10	15	Right-handed alpha
Helix 100	AL1	C	98	108	Right-handed alpha
Helix 101	AL2	C	131	141	Right-handed alpha
Helix 102	AL3	C	141	150	Right-handed alpha
Helix 103	AL4	C	160	178	Right-handed alpha
Helix 104	AL5	C	196	201	Right-handed alpha
Helix 105	AL6	C	246	258	Right-handed alpha
Helix 106	AL7	C	264	268	Right-handed 310
Helix 107	AL8	C	281	294	Right-handed alpha
Helix 108	AL9	C	308	318	Right-handed alpha
Helix 109	AM1	C	325	337	Right-handed alpha
Helix 110	AM2	C	344	356	Right-handed alpha
Helix 111	AM3	C	357	359	Right-handed 310
Helix 112	AM4	C	372	386	Right-handed alpha
Helix 113	AM5	C	395	403	Right-handed alpha
Helix 114	AM6	C	405	415	Right-handed alpha
Helix 115	AM7	C	421	435	Right-handed alpha
Helix 116	AM8	C	437	447	Right-handed alpha
Helix 117	AM9	C	450	455	Right-handed alpha
Helix 118	AN1	C	456	465	Right-handed alpha
Helix 119	AN2	C	471	480	Right-handed alpha
Helix 120	AN3	C	502	512	Right-handed alpha
Helix 121	AN4	C	558	569	Right-handed alpha
Helix 122	AN5	C	571	582	Right-handed alpha
Helix 123	AN6	C	585	602	Right-handed alpha
Helix 124	AN7	C	605	634	Right-handed alpha
Helix 125	AN8	C	634	644	Right-handed alpha
Helix 126	AN9	C	653	661	Right-handed alpha
Helix 127	AO1	C	663	668	Right-handed alpha
Helix 128	AO2	C	669	681	Right-handed alpha
Helix 129	AO3	C	689	699	Right-handed alpha
Helix 130	AO4	C	700	705	Right-handed 310
Helix 131	AO5	C	767	778	Right-handed alpha
Helix 132	AO6	C	778	803	Right-handed alpha
Helix 133	AO7	C	811	834	Right-handed alpha
Helix 134	AO8	C	852	862	Right-handed alpha
Helix 135	AO9	C	862	884	Right-handed alpha
Helix 136	AP1	C	887	910	Right-handed alpha
Helix 137	AP2	C	916	926	Right-handed alpha
Helix 138	AP3	C	926	953	Right-handed alpha
Helix 139	AP4	C	958	967	Right-handed alpha
Helix 140	AP5	C	967	975	Right-handed alpha
Helix 141	AP6	C	979	984	Right-handed alpha
Helix 142	AP7	C	1016	1033	Right-handed alpha
Helix 143	AP8	C	1033	1072	Right-handed alpha
Helix 144	AP9	C	1076	1078	Right-handed 310
Helix 145	AQ1	C	1079	1088	Right-handed alpha
Helix 146	AQ2	C	1116	1143	Right-handed alpha
Helix 147	AQ3	C	1143	1177	Right-handed alpha
Helix 148	AQ4	D	10	15	Right-handed alpha
Helix 149	AQ5	D	98	108	Right-handed alpha
Helix 150	AQ6	D	131	141	Right-handed alpha
Helix 151	AQ7	D	141	150	Right-handed alpha
Helix 152	AQ8	D	160	178	Right-handed alpha
Helix 153	AQ9	D	196	201	Right-handed alpha
Helix 154	AR1	D	246	258	Right-handed alpha
Helix 155	AR2	D	264	268	Right-handed 310
Helix 156	AR3	D	281	294	Right-handed alpha
Helix 157	AR4	D	308	318	Right-handed alpha
Helix 158	AR5	D	325	337	Right-handed alpha
Helix 159	AR6	D	344	356	Right-handed alpha
Helix 160	AR7	D	357	359	Right-handed 310
Helix 161	AR8	D	372	386	Right-handed alpha
Helix 162	AR9	D	395	403	Right-handed alpha
Helix 163	AS1	D	405	415	Right-handed alpha
Helix 164	AS2	D	421	435	Right-handed alpha
Helix 165	AS3	D	437	447	Right-handed alpha
Helix 166	AS4	D	450	455	Right-handed alpha
Helix 167	AS5	D	456	465	Right-handed alpha
Helix 168	AS6	D	471	480	Right-handed alpha
Helix 169	AS7	D	502	512	Right-handed alpha
Helix 170	AS8	D	558	569	Right-handed alpha
Helix 171	AS9	D	571	582	Right-handed alpha
Helix 172	AT1	D	585	602	Right-handed alpha
Helix 173	AT2	D	605	634	Right-handed alpha
Helix 174	AT3	D	634	644	Right-handed alpha
Helix 175	AT4	D	653	661	Right-handed alpha
Helix 176	AT5	D	663	668	Right-handed alpha
Helix 177	AT6	D	669	681	Right-handed alpha
Helix 178	AT7	D	689	699	Right-handed alpha
Helix 179	AT8	D	700	705	Right-handed 310
Helix 180	AT9	D	767	778	Right-handed alpha
Helix 181	AU1	D	778	803	Right-handed alpha
Helix 182	AU2	D	811	834	Right-handed alpha
Helix 183	AU3	D	852	862	Right-handed alpha
Helix 184	AU4	D	862	884	Right-handed alpha
Helix 185	AU5	D	887	910	Right-handed alpha
Helix 186	AU6	D	916	926	Right-handed alpha
Helix 187	AU7	D	926	953	Right-handed alpha
Helix 188	AU8	D	958	967	Right-handed alpha
Helix 189	AU9	D	967	975	Right-handed alpha
Helix 190	AV1	D	979	984	Right-handed alpha
Helix 191	AV2	D	1016	1033	Right-handed alpha
Helix 192	AV3	D	1033	1072	Right-handed alpha
Helix 193	AV4	D	1076	1078	Right-handed 310
Helix 194	AV5	D	1079	1088	Right-handed alpha
Helix 195	AV6	D	1116	1143	Right-handed alpha
Helix 196	AV7	D	1143	1177	Right-handed alpha

There are 16 sheets in PDB entry 9B93. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	16	19	first strand
Strand 2	A	68	71	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	76	78	first strand
Strand 2	A	88	90	anti-parallel

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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	92	94	first strand
Strand 2	A	231	236	parallel
Strand 3	A	184	190	parallel
Strand 4	A	152	155	parallel
Strand 5	A	118	121	parallel
Strand 6	A	273	277	parallel
Strand 7	A	298	301	parallel
Strand 8	A	361	364	parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	989	990	first strand
Strand 2	A	1000	1002	anti-parallel
Strand 3	A	1012	1013	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	16	19	first strand
Strand 2	B	68	71	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	76	78	first strand
Strand 2	B	88	90	anti-parallel

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There are 8 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	92	94	first strand
Strand 2	B	231	236	parallel
Strand 3	B	184	190	parallel
Strand 4	B	152	155	parallel
Strand 5	B	118	121	parallel
Strand 6	B	273	277	parallel
Strand 7	B	298	301	parallel
Strand 8	B	361	364	parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	989	990	first strand
Strand 2	B	1000	1002	anti-parallel
Strand 3	B	1012	1013	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	16	19	first strand
Strand 2	C	68	71	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	76	78	first strand
Strand 2	C	88	90	anti-parallel

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There are 8 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	92	94	first strand
Strand 2	C	231	236	parallel
Strand 3	C	184	190	parallel
Strand 4	C	152	155	parallel
Strand 5	C	118	121	parallel
Strand 6	C	273	277	parallel
Strand 7	C	298	301	parallel
Strand 8	C	361	364	parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	989	990	first strand
Strand 2	C	1000	1002	anti-parallel
Strand 3	C	1012	1013	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	16	19	first strand
Strand 2	D	68	71	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	76	78	first strand
Strand 2	D	88	90	anti-parallel

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There are 8 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	92	94	first strand
Strand 2	D	231	236	parallel
Strand 3	D	184	190	parallel
Strand 4	D	152	155	parallel
Strand 5	D	118	121	parallel
Strand 6	D	273	277	parallel
Strand 7	D	298	301	parallel
Strand 8	D	361	364	parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	989	990	first strand
Strand 2	D	1000	1002	anti-parallel
Strand 3	D	1012	1013	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9B93

Analysis of interatomic Contacts of Structural Units in PDB entry:
9B93