Analysis of interatomic Contacts of Structural Units in PDB entry:
9BA7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9BA7 entry

There are 2 chains in PDB entry 9BA7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1THR 260
B
 MET 1THR 260
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 9BA7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
14 24Right-handed alpha
Helix 2
AA2
A
70 83Right-handed alpha
Helix 3
AA3
A
96 111Right-handed alpha
Helix 4
AA4
A
120 126Right-handed alpha
Helix 5
AA5
A
132 141Right-handed alpha
Helix 6
AA6
A
151 169Right-handed alpha
Helix 7
AA7
A
180 191Right-handed alpha
Helix 8
AA8
A
192 195Right-handed 310
Helix 9
AA9
A
200 211Right-handed alpha
Helix 10
AB1
A
212 219Right-handed alpha
Helix 11
AB2
A
220 234Right-handed alpha
Helix 12
AB3
A
237 257Right-handed alpha
Helix 13
AB4
B
14 24Right-handed alpha
Helix 14
AB5
B
72 83Right-handed alpha
Helix 15
AB6
B
96 110Right-handed alpha
Helix 16
AB7
B
132 141Right-handed alpha
Helix 17
AB8
B
151 169Right-handed alpha
Helix 18
AB9
B
180 191Right-handed alpha
Helix 19
AC1
B
192 195Right-handed 310
Helix 20
AC2
B
200 210Right-handed alpha
Helix 21
AC3
B
212 219Right-handed alpha
Helix 22
AC4
B
220 234Right-handed alpha
Helix 23
AC5
B
237 257Right-handed alpha
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There are 4 sheets in PDB entry 9BA7. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
40 46first strand
Strand 2
A
49 55anti-parallel
Strand 3
A
2 9parallel
Strand 4
A
87 93parallel
Strand 5
A
114 119parallel
Strand 6
A
144 146parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
130 131first strand
Strand 2
A
258 259anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
40 46first strand
Strand 2
B
49 55anti-parallel
Strand 3
B
2 9parallel
Strand 4
B
87 93parallel
Strand 5
B
114 119parallel
Strand 6
B
144 146parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
130 131first strand
Strand 2
B
258 259anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il