Analysis of interatomic Contacts of Structural Units in PDB entry:
9BAN

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9BAN entry

There are 8 chains in PDB entry 9BAN (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	PRO 289	GLY 440
B	ASP 459	ARG 560
C	THR 295	ASP 318
D	ASP 459	ARG 560
E	GLU 20	PRO 238
F	SER 21	GLU 232
G	GLU 20	PRO 238
H	SER 21	GLU 232

There are 15 helices in PDB entry 9BAN. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	290	302	Right-handed alpha
Helix 2	AA2	A	376	393	Right-handed alpha
Helix 3	AA3	A	400	411	Right-handed alpha
Helix 4	AA4	A	420	439	Right-handed alpha
Helix 5	AA5	B	504	517	Right-handed alpha
Helix 6	AA6	C	296	302	Right-handed alpha
Helix 7	AA7	D	504	517	Right-handed alpha
Helix 8	AA8	E	47	51	Right-handed 310
Helix 9	AA9	E	182	184	Right-handed 310
Helix 10	AB1	F	140	147	Right-handed alpha
Helix 11	AB2	F	202	208	Right-handed alpha
Helix 12	AB3	G	47	51	Right-handed 310
Helix 13	AB4	G	182	184	Right-handed 310
Helix 14	AB5	H	140	147	Right-handed alpha
Helix 15	AB6	H	202	208	Right-handed alpha

There are 26 sheets in PDB entry 9BAN. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	463	465	first strand
Strand 2	B	487	489	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	468	470	first strand
Strand 2	B	482	484	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	477	479	first strand
Strand 2	B	531	540	anti-parallel
Strand 3	B	543	554	anti-parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	519	520	first strand
Strand 2	G	124	129	anti-parallel
Strand 3	G	111	120	anti-parallel
Strand 4	G	133	137	anti-parallel
Strand 5	G	29	31	parallel

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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	519	520	first strand
Strand 2	G	124	129	anti-parallel
Strand 3	G	111	120	anti-parallel
Strand 4	G	53	59	anti-parallel
Strand 5	G	63	70	anti-parallel
Strand 6	G	77	79	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	525	528	first strand
Strand 2	B	557	560	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	463	465	first strand
Strand 2	D	487	489	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	468	470	first strand
Strand 2	D	482	484	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	477	479	first strand
Strand 2	D	531	539	anti-parallel
Strand 3	D	545	554	anti-parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	519	520	first strand
Strand 2	E	124	129	anti-parallel
Strand 3	E	111	120	anti-parallel
Strand 4	E	133	137	anti-parallel
Strand 5	E	29	31	parallel

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There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	519	520	first strand
Strand 2	E	124	129	anti-parallel
Strand 3	E	111	120	anti-parallel
Strand 4	E	53	59	anti-parallel
Strand 5	E	63	70	anti-parallel
Strand 6	E	77	79	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	525	528	first strand
Strand 2	D	557	560	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	24	25	first strand
Strand 2	E	37	42	anti-parallel
Strand 3	E	97	102	anti-parallel
Strand 4	E	87	92	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	146	150	first strand
Strand 2	E	161	169	anti-parallel
Strand 3	E	202	210	anti-parallel
Strand 4	E	189	191	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	177	180	first strand
Strand 2	E	220	225	anti-parallel
Strand 3	E	230	235	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	24	27	first strand
Strand 2	F	39	45	anti-parallel
Strand 3	F	90	95	anti-parallel
Strand 4	F	82	87	anti-parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	65	68	first strand
Strand 2	F	53	57	anti-parallel
Strand 3	F	108	110	anti-parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	133	137	first strand
Strand 2	F	148	156	anti-parallel
Strand 3	F	193	201	anti-parallel
Strand 4	F	178	182	anti-parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	173	174	first strand
Strand 2	F	164	169	anti-parallel
Strand 3	F	210	216	anti-parallel
Strand 4	F	224	229	anti-parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	24	25	first strand
Strand 2	G	37	42	anti-parallel
Strand 3	G	97	102	anti-parallel
Strand 4	G	87	92	anti-parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	146	150	first strand
Strand 2	G	161	169	anti-parallel
Strand 3	G	202	210	anti-parallel
Strand 4	G	189	191	anti-parallel

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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	177	180	first strand
Strand 2	G	220	225	anti-parallel
Strand 3	G	230	235	anti-parallel

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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	24	27	first strand
Strand 2	H	39	45	anti-parallel
Strand 3	H	90	95	anti-parallel
Strand 4	H	82	87	anti-parallel

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There are 3 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	65	68	first strand
Strand 2	H	53	57	anti-parallel
Strand 3	H	108	110	anti-parallel

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There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	133	137	first strand
Strand 2	H	148	156	anti-parallel
Strand 3	H	193	201	anti-parallel
Strand 4	H	178	182	anti-parallel

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There are 3 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	164	169	first strand
Strand 2	H	210	216	anti-parallel
Strand 3	H	224	229	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9BAN

Analysis of interatomic Contacts of Structural Units in PDB entry:
9BAN