Analysis of interatomic Contacts of Structural Units in PDB entry:
9BAX

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9BAX entry

There are 8 chains in PDB entry 9BAX (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
C	GLU 724	ARG 787
B	SER 27	LEU 2083
F	THR 131	LEU 843
G	GLY 7	PRO 287
H	GLU 724	ARG 787
A	SER 27	LEU 2083
D	THR 131	LEU 843
E	GLY 7	PRO 287

There are274 helices in PDB entry 9BAX. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	C	727	736	Right-handed alpha
Helix 2	AA2	C	742	756	Right-handed alpha
Helix 3	AA3	C	760	787	Right-handed alpha
Helix 4	AA4	B	30	44	Right-handed alpha
Helix 5	AA5	B	49	60	Right-handed alpha
Helix 6	AA6	B	71	88	Right-handed alpha
Helix 7	AA7	B	92	106	Right-handed alpha
Helix 8	AA8	B	127	146	Right-handed alpha
Helix 9	AA9	B	149	170	Right-handed alpha
Helix 10	AB1	B	176	193	Right-handed alpha
Helix 11	AB2	B	203	209	Right-handed alpha
Helix 12	AB3	B	297	301	Right-handed alpha
Helix 13	AB4	B	325	340	Right-handed alpha
Helix 14	AB5	B	342	359	Right-handed alpha
Helix 15	AB6	B	369	385	Right-handed alpha
Helix 16	AB7	B	392	412	Right-handed alpha
Helix 17	AB8	B	433	448	Right-handed alpha
Helix 18	AB9	B	451	467	Right-handed alpha
Helix 19	AC1	B	479	496	Right-handed alpha
Helix 20	AC2	B	499	513	Right-handed alpha
Helix 21	AC3	B	516	523	Right-handed alpha
Helix 22	AC4	B	563	584	Right-handed alpha
Helix 23	AC5	B	586	601	Right-handed alpha
Helix 24	AC6	B	612	627	Right-handed alpha
Helix 25	AC7	B	633	644	Right-handed alpha
Helix 26	AC8	B	650	652	Right-handed 310
Helix 27	AC9	B	653	665	Right-handed alpha
Helix 28	AD1	B	668	686	Right-handed alpha
Helix 29	AD2	B	702	704	Right-handed 310
Helix 30	AD3	B	705	718	Right-handed alpha
Helix 31	AD4	B	722	741	Right-handed alpha
Helix 32	AD5	B	770	779	Right-handed alpha
Helix 33	AD6	B	788	806	Right-handed alpha
Helix 34	AD7	B	816	830	Right-handed alpha
Helix 35	AD8	B	840	845	Right-handed alpha
Helix 36	AD9	B	858	873	Right-handed alpha
Helix 37	AE1	B	875	883	Right-handed alpha
Helix 38	AE2	B	886	907	Right-handed alpha
Helix 39	AE3	B	913	921	Right-handed 310
Helix 40	AE4	B	922	928	Right-handed alpha
Helix 41	AE5	B	934	952	Right-handed alpha
Helix 42	AE6	B	957	974	Right-handed alpha
Helix 43	AE7	B	975	977	Right-handed 310
Helix 44	AE8	B	980	997	Right-handed alpha
Helix 45	AE9	B	998	1001	Right-handed 310
Helix 46	AF1	B	1005	1021	Right-handed alpha
Helix 47	AF2	B	1046	1072	Right-handed alpha
Helix 48	AF3	B	1072	1084	Right-handed alpha
Helix 49	AF4	B	1086	1093	Right-handed alpha
Helix 50	AF5	B	1097	1107	Right-handed alpha
Helix 51	AF6	B	1108	1111	Right-handed 310
Helix 52	AF7	B	1136	1157	Right-handed alpha
Helix 53	AF8	B	1169	1184	Right-handed alpha
Helix 54	AF9	B	1185	1202	Right-handed alpha
Helix 55	AG1	B	1207	1216	Right-handed alpha
Helix 56	AG2	B	1217	1221	Right-handed 310
Helix 57	AG3	B	1224	1241	Right-handed alpha
Helix 58	AG4	B	1244	1263	Right-handed alpha
Helix 59	AG5	B	1275	1279	Right-handed 310
Helix 60	AG6	B	1294	1310	Right-handed alpha
Helix 61	AG7	B	1315	1326	Right-handed alpha
Helix 62	AG8	B	1342	1345	Right-handed 310
Helix 63	AG9	B	1346	1362	Right-handed alpha
Helix 64	AH1	B	1369	1384	Right-handed alpha
Helix 65	AH2	B	1385	1388	Right-handed 310
Helix 66	AH3	B	1400	1416	Right-handed alpha
Helix 67	AH4	B	1478	1508	Right-handed alpha
Helix 68	AH5	B	1518	1533	Right-handed alpha
Helix 69	AH6	B	1540	1551	Right-handed alpha
Helix 70	AH7	B	1551	1557	Right-handed alpha
Helix 71	AH8	B	1566	1579	Right-handed alpha
Helix 72	AH9	B	1580	1583	Right-handed 310
Helix 73	AI1	B	1585	1590	Right-handed alpha
Helix 74	AI2	B	1591	1593	Right-handed 310
Helix 75	AI3	B	1616	1622	Right-handed alpha
Helix 76	AI4	B	1623	1625	Right-handed 310
Helix 77	AI5	B	1631	1643	Right-handed alpha
Helix 78	AI6	B	1646	1653	Right-handed alpha
Helix 79	AI7	B	1653	1660	Right-handed alpha
Helix 80	AI8	B	1667	1680	Right-handed alpha
Helix 81	AI9	B	1681	1695	Right-handed alpha
Helix 82	AJ1	B	1708	1720	Right-handed alpha
Helix 83	AJ2	B	1725	1749	Right-handed alpha
Helix 84	AJ3	B	1754	1768	Right-handed alpha
Helix 85	AJ4	B	1814	1821	Right-handed alpha
Helix 86	AJ5	B	1856	1876	Right-handed alpha
Helix 87	AJ6	B	1904	1913	Right-handed alpha
Helix 88	AJ7	B	1915	1925	Right-handed alpha
Helix 89	AJ8	B	1929	1954	Right-handed alpha
Helix 90	AJ9	B	1997	2004	Right-handed alpha
Helix 91	AK1	B	2010	2028	Right-handed alpha
Helix 92	AK2	B	2030	2040	Right-handed alpha
Helix 93	AK3	B	2052	2060	Right-handed alpha
Helix 94	AK4	B	2066	2081	Right-handed alpha
Helix 95	AK5	F	134	154	Right-handed alpha
Helix 96	AK6	F	168	196	Right-handed alpha
Helix 97	AK7	F	217	233	Right-handed alpha
Helix 98	AK8	F	234	247	Right-handed alpha
Helix 99	AK9	F	254	269	Right-handed alpha
Helix 100	AL1	F	274	278	Right-handed 310
Helix 101	AL2	F	323	342	Right-handed alpha
Helix 102	AL3	F	352	375	Right-handed alpha
Helix 103	AL4	F	378	389	Right-handed alpha
Helix 104	AL5	F	390	392	Right-handed 310
Helix 105	AL6	F	396	411	Right-handed alpha
Helix 106	AL7	F	413	427	Right-handed alpha
Helix 107	AL8	F	431	443	Right-handed alpha
Helix 108	AL9	F	448	461	Right-handed alpha
Helix 109	AM1	F	466	486	Right-handed alpha
Helix 110	AM2	F	490	511	Right-handed alpha
Helix 111	AM3	F	514	528	Right-handed alpha
Helix 112	AM4	F	530	545	Right-handed alpha
Helix 113	AM5	F	548	562	Right-handed alpha
Helix 114	AM6	F	564	579	Right-handed alpha
Helix 115	AM7	F	583	597	Right-handed alpha
Helix 116	AM8	F	598	617	Right-handed alpha
Helix 117	AM9	F	689	708	Right-handed alpha
Helix 118	AN1	F	711	723	Right-handed alpha
Helix 119	AN2	F	729	744	Right-handed alpha
Helix 120	AN3	F	747	758	Right-handed alpha
Helix 121	AN4	F	764	776	Right-handed alpha
Helix 122	AN5	F	781	794	Right-handed alpha
Helix 123	AN6	F	797	810	Right-handed alpha
Helix 124	AN7	F	813	829	Right-handed alpha
Helix 125	AN8	F	835	839	Right-handed 310
Helix 126	AN9	G	8	17	Right-handed alpha
Helix 127	AO1	G	36	46	Right-handed alpha
Helix 128	AO2	G	52	63	Right-handed alpha
Helix 129	AO3	G	68	76	Right-handed alpha
Helix 130	AO4	G	78	90	Right-handed alpha
Helix 131	AO5	G	100	114	Right-handed alpha
Helix 132	AO6	G	176	189	Right-handed alpha
Helix 133	AO7	G	196	211	Right-handed alpha
Helix 134	AO8	G	215	222	Right-handed alpha
Helix 135	AO9	G	233	248	Right-handed alpha
Helix 136	AP1	G	253	271	Right-handed alpha
Helix 137	AP2	G	272	284	Right-handed alpha
Helix 138	AP3	H	727	736	Right-handed alpha
Helix 139	AP4	H	742	756	Right-handed alpha
Helix 140	AP5	H	760	787	Right-handed alpha
Helix 141	AP6	A	30	44	Right-handed alpha
Helix 142	AP7	A	49	60	Right-handed alpha
Helix 143	AP8	A	71	88	Right-handed alpha
Helix 144	AP9	A	92	106	Right-handed alpha
Helix 145	AQ1	A	127	146	Right-handed alpha
Helix 146	AQ2	A	149	170	Right-handed alpha
Helix 147	AQ3	A	176	193	Right-handed alpha
Helix 148	AQ4	A	203	209	Right-handed alpha
Helix 149	AQ5	A	297	301	Right-handed alpha
Helix 150	AQ6	A	325	340	Right-handed alpha
Helix 151	AQ7	A	342	359	Right-handed alpha
Helix 152	AQ8	A	369	385	Right-handed alpha
Helix 153	AQ9	A	392	412	Right-handed alpha
Helix 154	AR1	A	433	448	Right-handed alpha
Helix 155	AR2	A	451	467	Right-handed alpha
Helix 156	AR3	A	479	496	Right-handed alpha
Helix 157	AR4	A	499	513	Right-handed alpha
Helix 158	AR5	A	516	523	Right-handed alpha
Helix 159	AR6	A	563	584	Right-handed alpha
Helix 160	AR7	A	586	601	Right-handed alpha
Helix 161	AR8	A	612	627	Right-handed alpha
Helix 162	AR9	A	633	644	Right-handed alpha
Helix 163	AS1	A	650	652	Right-handed 310
Helix 164	AS2	A	653	665	Right-handed alpha
Helix 165	AS3	A	668	686	Right-handed alpha
Helix 166	AS4	A	702	704	Right-handed 310
Helix 167	AS5	A	705	718	Right-handed alpha
Helix 168	AS6	A	722	741	Right-handed alpha
Helix 169	AS7	A	770	779	Right-handed alpha
Helix 170	AS8	A	788	806	Right-handed alpha
Helix 171	AS9	A	816	830	Right-handed alpha
Helix 172	AT1	A	840	845	Right-handed alpha
Helix 173	AT2	A	858	873	Right-handed alpha
Helix 174	AT3	A	875	883	Right-handed alpha
Helix 175	AT4	A	886	907	Right-handed alpha
Helix 176	AT5	A	913	921	Right-handed 310
Helix 177	AT6	A	922	928	Right-handed alpha
Helix 178	AT7	A	934	952	Right-handed alpha
Helix 179	AT8	A	957	974	Right-handed alpha
Helix 180	AT9	A	975	977	Right-handed 310
Helix 181	AU1	A	980	997	Right-handed alpha
Helix 182	AU2	A	998	1001	Right-handed 310
Helix 183	AU3	A	1005	1021	Right-handed alpha
Helix 184	AU4	A	1046	1072	Right-handed alpha
Helix 185	AU5	A	1072	1084	Right-handed alpha
Helix 186	AU6	A	1086	1093	Right-handed alpha
Helix 187	AU7	A	1097	1107	Right-handed alpha
Helix 188	AU8	A	1108	1111	Right-handed 310
Helix 189	AU9	A	1136	1157	Right-handed alpha
Helix 190	AV1	A	1169	1184	Right-handed alpha
Helix 191	AV2	A	1185	1202	Right-handed alpha
Helix 192	AV3	A	1207	1216	Right-handed alpha
Helix 193	AV4	A	1217	1221	Right-handed 310
Helix 194	AV5	A	1224	1241	Right-handed alpha
Helix 195	AV6	A	1244	1263	Right-handed alpha
Helix 196	AV7	A	1275	1279	Right-handed 310
Helix 197	AV8	A	1294	1310	Right-handed alpha
Helix 198	AV9	A	1315	1326	Right-handed alpha
Helix 199	AW1	A	1342	1345	Right-handed 310
Helix 200	AW2	A	1346	1362	Right-handed alpha
Helix 201	AW3	A	1369	1384	Right-handed alpha
Helix 202	AW4	A	1385	1388	Right-handed 310
Helix 203	AW5	A	1400	1416	Right-handed alpha
Helix 204	AW6	A	1478	1508	Right-handed alpha
Helix 205	AW7	A	1518	1533	Right-handed alpha
Helix 206	AW8	A	1540	1551	Right-handed alpha
Helix 207	AW9	A	1551	1557	Right-handed alpha
Helix 208	AX1	A	1566	1579	Right-handed alpha
Helix 209	AX2	A	1580	1583	Right-handed 310
Helix 210	AX3	A	1585	1590	Right-handed alpha
Helix 211	AX4	A	1591	1593	Right-handed 310
Helix 212	AX5	A	1616	1622	Right-handed alpha
Helix 213	AX6	A	1623	1625	Right-handed 310
Helix 214	AX7	A	1631	1643	Right-handed alpha
Helix 215	AX8	A	1646	1653	Right-handed alpha
Helix 216	AX9	A	1653	1660	Right-handed alpha
Helix 217	AY1	A	1667	1680	Right-handed alpha
Helix 218	AY2	A	1681	1695	Right-handed alpha
Helix 219	AY3	A	1708	1720	Right-handed alpha
Helix 220	AY4	A	1725	1749	Right-handed alpha
Helix 221	AY5	A	1754	1768	Right-handed alpha
Helix 222	AY6	A	1814	1821	Right-handed alpha
Helix 223	AY7	A	1856	1876	Right-handed alpha
Helix 224	AY8	A	1904	1913	Right-handed alpha
Helix 225	AY9	A	1915	1925	Right-handed alpha
Helix 226	AZ1	A	1929	1954	Right-handed alpha
Helix 227	AZ2	A	1997	2004	Right-handed alpha
Helix 228	AZ3	A	2010	2028	Right-handed alpha
Helix 229	AZ4	A	2030	2040	Right-handed alpha
Helix 230	AZ5	A	2052	2060	Right-handed alpha
Helix 231	AZ6	A	2066	2081	Right-handed alpha
Helix 232	AZ7	D	134	154	Right-handed alpha
Helix 233	AZ8	D	168	196	Right-handed alpha
Helix 234	AZ9	D	217	233	Right-handed alpha
Helix 235	BA1	D	234	247	Right-handed alpha
Helix 236	BA2	D	254	269	Right-handed alpha
Helix 237	BA3	D	274	278	Right-handed 310
Helix 238	BA4	D	323	342	Right-handed alpha
Helix 239	BA5	D	352	375	Right-handed alpha
Helix 240	BA6	D	378	389	Right-handed alpha
Helix 241	BA7	D	390	392	Right-handed 310
Helix 242	BA8	D	396	411	Right-handed alpha
Helix 243	BA9	D	413	427	Right-handed alpha
Helix 244	BB1	D	431	443	Right-handed alpha
Helix 245	BB2	D	448	461	Right-handed alpha
Helix 246	BB3	D	466	486	Right-handed alpha
Helix 247	BB4	D	490	511	Right-handed alpha
Helix 248	BB5	D	514	528	Right-handed alpha
Helix 249	BB6	D	530	545	Right-handed alpha
Helix 250	BB7	D	548	562	Right-handed alpha
Helix 251	BB8	D	564	579	Right-handed alpha
Helix 252	BB9	D	583	597	Right-handed alpha
Helix 253	BC1	D	598	617	Right-handed alpha
Helix 254	BC2	D	689	708	Right-handed alpha
Helix 255	BC3	D	711	723	Right-handed alpha
Helix 256	BC4	D	729	744	Right-handed alpha
Helix 257	BC5	D	747	758	Right-handed alpha
Helix 258	BC6	D	764	776	Right-handed alpha
Helix 259	BC7	D	781	794	Right-handed alpha
Helix 260	BC8	D	797	810	Right-handed alpha
Helix 261	BC9	D	813	829	Right-handed alpha
Helix 262	BD1	D	835	839	Right-handed 310
Helix 263	BD2	E	8	17	Right-handed alpha
Helix 264	BD3	E	36	46	Right-handed alpha
Helix 265	BD4	E	52	63	Right-handed alpha
Helix 266	BD5	E	68	76	Right-handed alpha
Helix 267	BD6	E	78	90	Right-handed alpha
Helix 268	BD7	E	100	114	Right-handed alpha
Helix 269	BD8	E	176	189	Right-handed alpha
Helix 270	BD9	E	196	211	Right-handed alpha
Helix 271	BE1	E	215	222	Right-handed alpha
Helix 272	BE2	E	233	248	Right-handed alpha
Helix 273	BE3	E	253	271	Right-handed alpha
Helix 274	BE4	E	272	284	Right-handed alpha

There are 10 sheets in PDB entry 9BAX. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	68	70	first strand
Strand 2	B	110	112	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1032	1033	first strand
Strand 2	B	1040	1041	anti-parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1782	1787	first strand
Strand 2	B	1804	1811	anti-parallel
Strand 3	B	1842	1851	anti-parallel
Strand 4	B	1893	1897	anti-parallel
Strand 5	B	1886	1890	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1964	1965	first strand
Strand 2	B	1971	1972	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	123	125	first strand
Strand 2	G	160	163	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	68	70	first strand
Strand 2	A	110	112	parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1032	1033	first strand
Strand 2	A	1040	1041	anti-parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1782	1787	first strand
Strand 2	A	1804	1811	anti-parallel
Strand 3	A	1842	1851	anti-parallel
Strand 4	A	1893	1897	anti-parallel
Strand 5	A	1886	1890	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1964	1965	first strand
Strand 2	A	1971	1972	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	123	125	first strand
Strand 2	E	160	163	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9BAX

Analysis of interatomic Contacts of Structural Units in PDB entry:
9BAX