Analysis of interatomic Contacts of Structural Units in PDB entry:
9BCS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9BCS entry

There are 2 chains in PDB entry 9BCS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 471ARG 1023
B
 SER 473ARG 1023
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 34 helices in PDB entry 9BCS. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
545 557Right-handed alpha
Helix 2
AA2
A
587 594Right-handed alpha
Helix 3
AA3
A
600 620Right-handed alpha
Helix 4
AA4
A
660 669Right-handed alpha
Helix 5
AA5
A
685 703Right-handed alpha
Helix 6
AA6
A
715 726Right-handed alpha
Helix 7
AA7
A
742 752Right-handed alpha
Helix 8
AA8
A
761 774Right-handed alpha
Helix 9
AA9
A
781 818Right-handed alpha
Helix 10
AB1
A
824 831Right-handed alpha
Helix 11
AB2
A
852 857Right-handed alpha
Helix 12
AB3
A
861 866Right-handed alpha
Helix 13
AB4
A
868 877Right-handed alpha
Helix 14
AB5
A
908 922Right-handed alpha
Helix 15
AB6
A
964 976Right-handed alpha
Helix 16
AB7
A
986 996Right-handed alpha
Helix 17
AB8
B
545 558Right-handed alpha
Helix 18
AB9
B
587 594Right-handed alpha
Helix 19
AC1
B
600 621Right-handed alpha
Helix 20
AC2
B
630 634Right-handed 310
Helix 21
AC3
B
659 667Right-handed alpha
Helix 22
AC4
B
671 677Right-handed alpha
Helix 23
AC5
B
685 702Right-handed alpha
Helix 24
AC6
B
715 726Right-handed alpha
Helix 25
AC7
B
741 752Right-handed alpha
Helix 26
AC8
B
761 773Right-handed alpha
Helix 27
AC9
B
781 818Right-handed alpha
Helix 28
AD1
B
822 832Right-handed alpha
Helix 29
AD2
B
852 857Right-handed alpha
Helix 30
AD3
B
861 877Right-handed alpha
Helix 31
AD4
B
905 912Right-handed 310
Helix 32
AD5
B
915 920Right-handed alpha
Helix 33
AD6
B
964 975Right-handed alpha
Helix 34
AD7
B
985 996Right-handed alpha
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There are 7 sheets in PDB entry 9BCS. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
533 536first strand
Strand 2
A
575 580anti-parallel
Strand 3
A
566 572anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
634 635first strand
Strand 2
A
643 644anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
886 887first strand
Strand 2
A
897 899anti-parallel
Strand 3
A
838 850anti-parallel
Strand 4
A
939 953anti-parallel
Strand 5
A
959 962anti-parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
886 887first strand
Strand 2
A
897 899anti-parallel
Strand 3
A
838 850anti-parallel
Strand 4
A
939 953anti-parallel
Strand 5
A
982 985parallel
Strand 6
A
1016 1022anti-parallel
Strand 7
A
998 1002anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
566 568first strand
Strand 2
B
579 580anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
838 839first strand
Strand 2
B
949 953anti-parallel
Strand 3
B
959 963anti-parallel
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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
886 891first strand
Strand 2
B
894 899anti-parallel
Strand 3
B
843 850anti-parallel
Strand 4
B
939 946anti-parallel
Strand 5
B
981 984parallel
Strand 6
B
1016 1022anti-parallel
Strand 7
B
998 1004anti-parallel
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