Analysis of interatomic Contacts of Structural Units in PDB entry:
9BD7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9BD7 entry

There are 2 chains in PDB entry 9BD7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 PRO 10ALA 591
A
 PRO 10ALA 591
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 55 helices in PDB entry 9BD7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
11 21Right-handed alpha
Helix 2
AA2
B
22 25Right-handed 310
Helix 3
AA3
B
26 60Right-handed alpha
Helix 4
AA4
B
82 125Right-handed alpha
Helix 5
AA5
B
128 134Right-handed alpha
Helix 6
AA6
B
136 146Right-handed alpha
Helix 7
AA7
B
147 150Right-handed 310
Helix 8
AA8
B
151 156Right-handed alpha
Helix 9
AA9
B
156 180Right-handed alpha
Helix 10
AB1
B
180 190Right-handed alpha
Helix 11
AB2
B
190 229Right-handed alpha
Helix 12
AB3
B
229 236Right-handed alpha
Helix 13
AB4
B
238 289Right-handed alpha
Helix 14
AB5
B
297 306Right-handed alpha
Helix 15
AB6
B
308 337Right-handed alpha
Helix 16
AB7
B
395 401Right-handed alpha
Helix 17
AB8
B
425 432Right-handed alpha
Helix 18
AB9
B
446 452Right-handed alpha
Helix 19
AC1
B
453 457Right-handed 310
Helix 20
AC2
B
460 471Right-handed alpha
Helix 21
AC3
B
473 479Right-handed alpha
Helix 22
AC4
B
482 486Right-handed 310
Helix 23
AC5
B
489 493Right-handed 310
Helix 24
AC6
B
496 512Right-handed alpha
Helix 25
AC7
B
526 538Right-handed alpha
Helix 26
AC8
B
552 556Right-handed 310
Helix 27
AC9
B
575 582Right-handed alpha
Helix 28
AD1
B
584 591Right-handed alpha
Helix 29
AD2
A
11 21Right-handed alpha
Helix 30
AD3
A
22 25Right-handed 310
Helix 31
AD4
A
26 60Right-handed alpha
Helix 32
AD5
A
82 125Right-handed alpha
Helix 33
AD6
A
128 134Right-handed alpha
Helix 34
AD7
A
136 146Right-handed alpha
Helix 35
AD8
A
147 150Right-handed 310
Helix 36
AD9
A
151 180Right-handed alpha
Helix 37
AE1
A
180 190Right-handed alpha
Helix 38
AE2
A
190 229Right-handed alpha
Helix 39
AE3
A
229 236Right-handed alpha
Helix 40
AE4
A
238 289Right-handed alpha
Helix 41
AE5
A
297 306Right-handed alpha
Helix 42
AE6
A
308 337Right-handed alpha
Helix 43
AE7
A
395 401Right-handed alpha
Helix 44
AE8
A
425 432Right-handed alpha
Helix 45
AE9
A
446 452Right-handed alpha
Helix 46
AF1
A
453 457Right-handed 310
Helix 47
AF2
A
460 471Right-handed alpha
Helix 48
AF3
A
473 479Right-handed alpha
Helix 49
AF4
A
482 486Right-handed 310
Helix 50
AF5
A
489 493Right-handed 310
Helix 51
AF6
A
496 511Right-handed alpha
Helix 52
AF7
A
526 538Right-handed alpha
Helix 53
AF8
A
552 556Right-handed 310
Helix 54
AF9
A
575 582Right-handed alpha
Helix 55
AG1
A
584 591Right-handed alpha
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There are 4 sheets in PDB entry 9BD7. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
373 380first strand
Strand 2
B
356 363anti-parallel
Strand 3
B
411 416anti-parallel
Strand 4
B
419 420anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
433 436first strand
Strand 2
B
515 519parallel
Strand 3
B
545 549parallel
Strand 4
B
385 389parallel
Strand 5
B
561 566parallel
Strand 6
B
569 574anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
373 380first strand
Strand 2
A
356 363anti-parallel
Strand 3
A
411 416anti-parallel
Strand 4
A
419 420anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
433 436first strand
Strand 2
A
515 519parallel
Strand 3
A
545 549parallel
Strand 4
A
385 389parallel
Strand 5
A
561 566parallel
Strand 6
A
569 574anti-parallel
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