Analysis of interatomic Contacts of Structural Units in PDB entry:
9BE2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9BE2 entry

There is 1 chain in PDB entry 9BE2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ASN 335
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 9BE2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
33 50Right-handed alpha
Helix 2
AA2
A
63 71Right-handed alpha
Helix 3
AA3
A
76 93Right-handed alpha
Helix 4
AA4
A
154 158Right-handed alpha
Helix 5
AA5
A
177 187Right-handed alpha
Helix 6
AA6
A
193 210Right-handed alpha
Helix 7
AA7
A
215 235Right-handed alpha
Helix 8
AA8
A
242 248Right-handed alpha
Helix 9
AA9
A
256 263Right-handed alpha
Helix 10
AB1
A
275 281Right-handed alpha
Helix 11
AB2
A
297 301Right-handed 310
Helix 12
AB3
A
320 332Right-handed alpha
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There are 6 sheets in PDB entry 9BE2. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
21 23first strand
Strand 2
A
4 15anti-parallel
Strand 3
A
101 110anti-parallel
Strand 4
A
113 126anti-parallel
Strand 5
A
138 141anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
21 23first strand
Strand 2
A
4 15anti-parallel
Strand 3
A
101 110anti-parallel
Strand 4
A
113 126anti-parallel
Strand 5
A
149 153anti-parallel
Strand 6
A
167 169anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
55 57first strand
Strand 2
A
188 190anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
240 241first strand
Strand 2
A
271 272anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
287 289first strand
Strand 2
A
292 294anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
305 308first strand
Strand 2
A
313 316anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il