Analysis of interatomic Contacts of Structural Units in PDB entry:
9BFG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9BFG entry

There are 2 chains in PDB entry 9BFG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 11GLU 543
B
 ALA 13LYS 544
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 46 helices in PDB entry 9BFG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
19 33Right-handed alpha
Helix 2
AA2
A
50 63Right-handed alpha
Helix 3
AA3
A
69 76Right-handed alpha
Helix 4
AA4
A
78 83Right-handed alpha
Helix 5
AA5
A
105 114Right-handed alpha
Helix 6
AA6
A
135 150Right-handed alpha
Helix 7
AA7
A
151 153Right-handed 310
Helix 8
AA8
A
188 202Right-handed alpha
Helix 9
AA9
A
232 234Right-handed 310
Helix 10
AB1
A
235 255Right-handed alpha
Helix 11
AB2
A
267 279Right-handed alpha
Helix 12
AB3
A
281 286Right-handed alpha
Helix 13
AB4
A
287 299Right-handed alpha
Helix 14
AB5
A
313 315Right-handed 310
Helix 15
AB6
A
325 335Right-handed alpha
Helix 16
AB7
A
336 339Right-handed 310
Helix 17
AB8
A
343 360Right-handed alpha
Helix 18
AB9
A
405 420Right-handed alpha
Helix 19
AC1
A
421 424Right-handed 310
Helix 20
AC2
A
425 433Right-handed alpha
Helix 21
AC3
A
435 439Right-handed 310
Helix 22
AC4
A
458 463Right-handed alpha
Helix 23
AC5
A
482 486Right-handed 310
Helix 24
AC6
A
519 543Right-handed alpha
Helix 25
AC7
B
19 34Right-handed alpha
Helix 26
AC8
B
50 64Right-handed alpha
Helix 27
AC9
B
69 76Right-handed alpha
Helix 28
AD1
B
78 84Right-handed alpha
Helix 29
AD2
B
105 114Right-handed alpha
Helix 30
AD3
B
135 150Right-handed alpha
Helix 31
AD4
B
151 153Right-handed 310
Helix 32
AD5
B
188 202Right-handed alpha
Helix 33
AD6
B
232 234Right-handed 310
Helix 34
AD7
B
235 255Right-handed alpha
Helix 35
AD8
B
267 279Right-handed alpha
Helix 36
AD9
B
281 286Right-handed alpha
Helix 37
AE1
B
287 299Right-handed alpha
Helix 38
AE2
B
313 315Right-handed 310
Helix 39
AE3
B
325 335Right-handed alpha
Helix 40
AE4
B
343 360Right-handed alpha
Helix 41
AE5
B
405 419Right-handed alpha
Helix 42
AE6
B
420 424Right-handed 310
Helix 43
AE7
B
425 433Right-handed alpha
Helix 44
AE8
B
435 439Right-handed 310
Helix 45
AE9
B
458 463Right-handed alpha
Helix 46
AF1
B
519 544Right-handed alpha
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There are 8 sheets in PDB entry 9BFG. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
66 67first strand
Strand 2
A
87 88anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
100 102first strand
Strand 2
A
163 168anti-parallel
Strand 3
A
155 160anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
177 182first strand
Strand 2
A
212 219parallel
Strand 3
A
222 230anti-parallel
Strand 4
A
123 130anti-parallel
Strand 5
A
468 469anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
317 323first strand
Strand 2
A
506 514anti-parallel
Strand 3
A
496 503anti-parallel
Strand 4
A
450 457parallel
Strand 5
A
364 371parallel
Strand 6
A
392 399anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
66 67first strand
Strand 2
B
87 88anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
100 101first strand
Strand 2
B
164 168anti-parallel
Strand 3
B
155 159anti-parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
177 182first strand
Strand 2
B
212 219parallel
Strand 3
B
222 230anti-parallel
Strand 4
B
123 130anti-parallel
Strand 5
B
468 469anti-parallel
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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
317 323first strand
Strand 2
B
506 514anti-parallel
Strand 3
B
496 503anti-parallel
Strand 4
B
450 457parallel
Strand 5
B
364 371parallel
Strand 6
B
392 399anti-parallel
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