Analysis of interatomic Contacts of Structural Units in PDB entry:
9BGN

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9BGN entry

There are 9 chains in PDB entry 9BGN (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
C	MET 1	LEU 399
D	MET 1	LEU 399
E	MET 1	LEU 399
F	MET 1	LEU 399
H	MET 1	LEU 399
I	MET 1	LEU 399
A	MET 1	LEU 399
B	MET 1	LEU 399
G	MET 1	LEU 399

There are 83 helices in PDB entry 9BGN. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	C	57	61	Right-handed 310
Helix 2	AA2	C	101	108	Right-handed alpha
Helix 3	AA3	C	144	150	Right-handed alpha
Helix 4	AA4	C	154	182	Right-handed alpha
Helix 5	AA5	C	194	198	Right-handed 310
Helix 6	AA6	C	205	219	Right-handed alpha
Helix 7	AA7	C	251	257	Right-handed alpha
Helix 8	AA8	C	270	274	Right-handed alpha
Helix 9	AA9	C	386	390	Right-handed 310
Helix 10	AB1	D	101	108	Right-handed alpha
Helix 11	AB2	D	144	149	Right-handed alpha
Helix 12	AB3	D	154	182	Right-handed alpha
Helix 13	AB4	D	205	219	Right-handed alpha
Helix 14	AB5	D	251	256	Right-handed alpha
Helix 15	AB6	D	271	277	Right-handed 310
Helix 16	AB7	D	358	362	Right-handed 310
Helix 17	AB8	D	386	388	Right-handed 310
Helix 18	AB9	E	57	61	Right-handed 310
Helix 19	AC1	E	101	108	Right-handed alpha
Helix 20	AC2	E	144	149	Right-handed alpha
Helix 21	AC3	E	154	182	Right-handed alpha
Helix 22	AC4	E	205	219	Right-handed alpha
Helix 23	AC5	E	251	257	Right-handed alpha
Helix 24	AC6	E	270	274	Right-handed alpha
Helix 25	AC7	E	358	362	Right-handed 310
Helix 26	AC8	E	386	388	Right-handed 310
Helix 27	AC9	F	46	51	Right-handed 310
Helix 28	AD1	F	101	106	Right-handed alpha
Helix 29	AD2	F	144	149	Right-handed alpha
Helix 30	AD3	F	154	182	Right-handed alpha
Helix 31	AD4	F	194	198	Right-handed 310
Helix 32	AD5	F	205	219	Right-handed alpha
Helix 33	AD6	F	251	256	Right-handed alpha
Helix 34	AD7	F	270	274	Right-handed alpha
Helix 35	AD8	F	358	362	Right-handed 310
Helix 36	AD9	F	386	388	Right-handed 310
Helix 37	AE1	H	46	51	Right-handed 310
Helix 38	AE2	H	101	108	Right-handed alpha
Helix 39	AE3	H	144	149	Right-handed alpha
Helix 40	AE4	H	154	182	Right-handed alpha
Helix 41	AE5	H	205	219	Right-handed alpha
Helix 42	AE6	H	251	256	Right-handed alpha
Helix 43	AE7	H	271	273	Right-handed 310
Helix 44	AE8	H	358	362	Right-handed 310
Helix 45	AE9	H	386	390	Right-handed 310
Helix 46	AF1	I	47	51	Right-handed 310
Helix 47	AF2	I	101	106	Right-handed alpha
Helix 48	AF3	I	144	149	Right-handed alpha
Helix 49	AF4	I	154	182	Right-handed alpha
Helix 50	AF5	I	194	198	Right-handed 310
Helix 51	AF6	I	205	219	Right-handed alpha
Helix 52	AF7	I	251	256	Right-handed alpha
Helix 53	AF8	I	271	273	Right-handed 310
Helix 54	AF9	I	358	362	Right-handed 310
Helix 55	AG1	I	386	388	Right-handed 310
Helix 56	AG2	A	46	51	Right-handed 310
Helix 57	AG3	A	101	107	Right-handed alpha
Helix 58	AG4	A	144	149	Right-handed alpha
Helix 59	AG5	A	154	180	Right-handed alpha
Helix 60	AG6	A	194	198	Right-handed 310
Helix 61	AG7	A	205	219	Right-handed alpha
Helix 62	AG8	A	251	257	Right-handed alpha
Helix 63	AG9	A	271	277	Right-handed 310
Helix 64	AH1	A	358	362	Right-handed 310
Helix 65	AH2	A	386	388	Right-handed 310
Helix 66	AH3	B	46	50	Right-handed 310
Helix 67	AH4	B	101	108	Right-handed alpha
Helix 68	AH5	B	144	149	Right-handed alpha
Helix 69	AH6	B	154	182	Right-handed alpha
Helix 70	AH7	B	205	219	Right-handed alpha
Helix 71	AH8	B	251	257	Right-handed alpha
Helix 72	AH9	B	270	274	Right-handed alpha
Helix 73	AI1	B	358	362	Right-handed 310
Helix 74	AI2	B	386	388	Right-handed 310
Helix 75	AI3	G	47	51	Right-handed 310
Helix 76	AI4	G	144	149	Right-handed alpha
Helix 77	AI5	G	154	181	Right-handed alpha
Helix 78	AI6	G	205	219	Right-handed alpha
Helix 79	AI7	G	248	250	Right-handed 310
Helix 80	AI8	G	251	256	Right-handed alpha
Helix 81	AI9	G	271	273	Right-handed 310
Helix 82	AJ1	G	358	362	Right-handed 310
Helix 83	AJ2	G	386	389	Right-handed 310

There are 48 sheets in PDB entry 9BGN. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1, AF2, AF3,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	32	33	first strand
Strand 2	B	64	70	parallel
Strand 3	C	38	39	parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	32	33	first strand
Strand 2	B	64	70	parallel
Strand 3	B	125	131	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	53	54	first strand
Strand 2	C	337	339	parallel
Strand 3	C	382	383	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	126	130	first strand
Strand 2	C	64	69	anti-parallel
Strand 3	D	32	38	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	83	84	first strand
Strand 2	C	88	89	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	134	143	first strand
Strand 2	C	371	380	anti-parallel
Strand 3	C	351	355	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	186	187	first strand
Strand 2	C	392	395	parallel
Strand 3	C	326	327	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	243	247	first strand
Strand 2	C	290	294	parallel
Strand 3	C	283	286	anti-parallel
Strand 4	C	268	269	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	318	319	first strand
Strand 2	C	322	323	anti-parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	53	55	first strand
Strand 2	D	336	340	parallel
Strand 3	D	371	384	anti-parallel
Strand 4	D	125	143	anti-parallel
Strand 5	D	63	70	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	53	55	first strand
Strand 2	D	336	340	parallel
Strand 3	D	371	384	anti-parallel
Strand 4	D	351	355	anti-parallel

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There are 7 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	186	187	first strand
Strand 2	D	390	395	parallel
Strand 3	D	326	331	anti-parallel
Strand 4	D	243	248	anti-parallel
Strand 5	D	290	295	parallel
Strand 6	D	283	286	anti-parallel
Strand 7	D	268	269	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	318	319	first strand
Strand 2	D	322	323	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	32	39	first strand
Strand 2	F	64	69	parallel
Strand 3	F	126	131	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	53	55	first strand
Strand 2	E	337	340	parallel
Strand 3	E	371	383	anti-parallel
Strand 4	E	134	143	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	53	55	first strand
Strand 2	E	337	340	parallel
Strand 3	E	371	383	anti-parallel
Strand 4	E	351	355	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	65	70	first strand
Strand 2	E	125	130	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	82	83	first strand
Strand 2	E	89	90	anti-parallel

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There are 7 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	186	187	first strand
Strand 2	E	390	395	parallel
Strand 3	E	326	331	anti-parallel
Strand 4	E	243	247	anti-parallel
Strand 5	E	290	294	parallel
Strand 6	E	283	286	anti-parallel
Strand 7	E	268	269	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	318	319	first strand
Strand 2	E	322	323	anti-parallel

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There are 6 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	32	38	first strand
Strand 2	G	63	69	parallel
Strand 3	G	126	143	anti-parallel
Strand 4	G	371	383	anti-parallel
Strand 5	G	337	340	anti-parallel
Strand 6	G	53	55	parallel

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There are 5 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	32	38	first strand
Strand 2	G	63	69	parallel
Strand 3	G	126	143	anti-parallel
Strand 4	G	371	383	anti-parallel
Strand 5	G	351	355	anti-parallel

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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	53	55	first strand
Strand 2	F	336	340	parallel
Strand 3	F	371	384	anti-parallel
Strand 4	F	134	143	anti-parallel

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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	53	55	first strand
Strand 2	F	336	340	parallel
Strand 3	F	371	384	anti-parallel
Strand 4	F	351	355	anti-parallel

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There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	186	187	first strand
Strand 2	F	390	395	parallel
Strand 3	F	322	331	anti-parallel
Strand 4	F	301	307	anti-parallel

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There are 6 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	268	269	first strand
Strand 2	F	283	286	anti-parallel
Strand 3	F	290	295	anti-parallel
Strand 4	F	243	248	parallel
Strand 5	F	322	331	anti-parallel
Strand 6	F	318	319	anti-parallel

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There are 4 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	53	55	first strand
Strand 2	H	337	340	parallel
Strand 3	H	371	383	anti-parallel
Strand 4	H	351	355	anti-parallel

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There are 6 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	53	55	first strand
Strand 2	H	337	340	parallel
Strand 3	H	371	383	anti-parallel
Strand 4	H	126	143	anti-parallel
Strand 5	H	63	69	anti-parallel
Strand 6	I	31	39	parallel

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There are 7 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	186	187	first strand
Strand 2	H	391	395	parallel
Strand 3	H	326	330	anti-parallel
Strand 4	H	243	247	anti-parallel
Strand 5	H	290	294	parallel
Strand 6	H	283	286	anti-parallel
Strand 7	H	268	269	anti-parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	318	319	first strand
Strand 2	H	322	323	anti-parallel

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There are 5 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	53	55	first strand
Strand 2	I	336	340	parallel
Strand 3	I	371	384	anti-parallel
Strand 4	I	126	143	anti-parallel
Strand 5	I	63	69	anti-parallel

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There are 4 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	53	55	first strand
Strand 2	I	336	340	parallel
Strand 3	I	371	384	anti-parallel
Strand 4	I	351	355	anti-parallel

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There are 4 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	186	187	first strand
Strand 2	I	390	395	parallel
Strand 3	I	322	331	anti-parallel
Strand 4	I	301	307	anti-parallel

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There are 6 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	268	269	first strand
Strand 2	I	283	286	anti-parallel
Strand 3	I	290	294	anti-parallel
Strand 4	I	243	247	parallel
Strand 5	I	322	331	anti-parallel
Strand 6	I	318	319	anti-parallel

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There are 4 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	54	56	first strand
Strand 2	A	336	341	parallel
Strand 3	A	371	384	anti-parallel
Strand 4	A	134	143	anti-parallel

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There are 4 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	54	56	first strand
Strand 2	A	336	341	parallel
Strand 3	A	371	384	anti-parallel
Strand 4	A	351	355	anti-parallel

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There are 2 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	65	68	first strand
Strand 2	A	127	130	anti-parallel

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There are 2 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	82	84	first strand
Strand 2	A	87	90	anti-parallel

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There are 7 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	186	187	first strand
Strand 2	A	390	395	parallel
Strand 3	A	326	331	anti-parallel
Strand 4	A	244	247	anti-parallel
Strand 5	A	290	294	parallel
Strand 6	A	283	287	anti-parallel
Strand 7	A	268	269	anti-parallel

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There are 2 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	318	319	first strand
Strand 2	A	322	323	anti-parallel

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There are 4 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	53	56	first strand
Strand 2	B	337	341	parallel
Strand 3	B	371	383	anti-parallel
Strand 4	B	134	143	anti-parallel

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There are 4 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	53	56	first strand
Strand 2	B	337	341	parallel
Strand 3	B	371	383	anti-parallel
Strand 4	B	350	355	anti-parallel

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There are 2 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	83	84	first strand
Strand 2	B	87	89	anti-parallel

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There are 7 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	186	187	first strand
Strand 2	B	390	395	parallel
Strand 3	B	326	331	anti-parallel
Strand 4	B	243	247	anti-parallel
Strand 5	B	290	294	parallel
Strand 6	B	283	286	anti-parallel
Strand 7	B	268	269	anti-parallel

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There are 2 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	318	319	first strand
Strand 2	B	322	323	anti-parallel

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There are 3 strands in AF1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	185	187	first strand
Strand 2	G	391	395	parallel
Strand 3	G	326	330	anti-parallel

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There are 4 strands in AF2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	243	247	first strand
Strand 2	G	290	294	parallel
Strand 3	G	283	286	anti-parallel
Strand 4	G	268	269	anti-parallel

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There are 2 strands in AF3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	318	319	first strand
Strand 2	G	322	323	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9BGN

Analysis of interatomic Contacts of Structural Units in PDB entry:
9BGN