Analysis of interatomic Contacts of Structural Units in PDB entry:
9BH3


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9BH3 entry

There are 4 chains in PDB entry 9BH3 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 3LYS 308
B
 ALA 3LYS 308
C
 ALA 3LYS 308
D
 ALA 3LYS 308
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 65 helices in PDB entry 9BH3. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
17 34Right-handed alpha
Helix 2
AA2
A
50 60Right-handed alpha
Helix 3
AA3
A
69 76Right-handed 310
Helix 4
AA4
A
77 85Right-handed 310
Helix 5
AA5
A
91 101Right-handed alpha
Helix 6
AA6
A
102 115Right-handed alpha
Helix 7
AA7
A
139 144Right-handed 310
Helix 8
AA8
A
153 164Right-handed alpha
Helix 9
AA9
A
171 173Right-handed 310
Helix 10
AB1
A
174 181Right-handed alpha
Helix 11
AB2
A
191 197Right-handed alpha
Helix 12
AB3
A
198 203Right-handed 310
Helix 13
AB4
A
222 227Right-handed alpha
Helix 14
AB5
A
229 255Right-handed alpha
Helix 15
AB6
A
257 265Right-handed alpha
Helix 16
AB7
A
274 306Right-handed alpha
Helix 17
AB8
B
17 34Right-handed alpha
Helix 18
AB9
B
50 60Right-handed alpha
Helix 19
AC1
B
69 76Right-handed 310
Helix 20
AC2
B
77 85Right-handed 310
Helix 21
AC3
B
91 101Right-handed alpha
Helix 22
AC4
B
102 115Right-handed alpha
Helix 23
AC5
B
139 144Right-handed 310
Helix 24
AC6
B
153 164Right-handed alpha
Helix 25
AC7
B
171 173Right-handed 310
Helix 26
AC8
B
174 181Right-handed alpha
Helix 27
AC9
B
191 197Right-handed alpha
Helix 28
AD1
B
198 203Right-handed 310
Helix 29
AD2
B
222 227Right-handed alpha
Helix 30
AD3
B
229 255Right-handed alpha
Helix 31
AD4
B
257 265Right-handed alpha
Helix 32
AD5
B
274 306Right-handed alpha
Helix 33
AD6
C
17 34Right-handed alpha
Helix 34
AD7
C
50 60Right-handed alpha
Helix 35
AD8
C
69 76Right-handed 310
Helix 36
AD9
C
77 85Right-handed 310
Helix 37
AE1
C
91 101Right-handed alpha
Helix 38
AE2
C
102 115Right-handed alpha
Helix 39
AE3
C
139 144Right-handed 310
Helix 40
AE4
C
153 164Right-handed alpha
Helix 41
AE5
C
171 173Right-handed 310
Helix 42
AE6
C
174 181Right-handed alpha
Helix 43
AE7
C
191 197Right-handed alpha
Helix 44
AE8
C
198 203Right-handed 310
Helix 45
AE9
C
222 227Right-handed alpha
Helix 46
AF1
C
229 265Right-handed alpha
Helix 47
AF2
C
274 281Right-handed alpha
Helix 48
AF3
C
281 306Right-handed alpha
Helix 49
AF4
D
17 34Right-handed alpha
Helix 50
AF5
D
50 60Right-handed alpha
Helix 51
AF6
D
69 76Right-handed 310
Helix 52
AF7
D
77 85Right-handed 310
Helix 53
AF8
D
91 101Right-handed alpha
Helix 54
AF9
D
102 115Right-handed alpha
Helix 55
AG1
D
139 144Right-handed 310
Helix 56
AG2
D
153 164Right-handed alpha
Helix 57
AG3
D
171 173Right-handed 310
Helix 58
AG4
D
174 181Right-handed alpha
Helix 59
AG5
D
191 197Right-handed alpha
Helix 60
AG6
D
198 203Right-handed 310
Helix 61
AG7
D
222 227Right-handed alpha
Helix 62
AG8
D
229 265Right-handed alpha
Helix 63
AG9
D
274 281Right-handed alpha
Helix 64
AH1
D
281 293Right-handed alpha
Helix 65
AH2
D
293 305Right-handed alpha
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There are 8 sheets in PDB entry 9BH3. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
38 43first strand
Strand 2
A
5 10parallel
Strand 3
A
65 68parallel
Strand 4
A
213 221anti-parallel
Strand 5
A
118 133anti-parallel
Strand 6
A
186 190anti-parallel
Strand 7
A
147 150parallel
Strand 8
A
166 169parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
38 43first strand
Strand 2
A
5 10parallel
Strand 3
A
65 68parallel
Strand 4
A
213 221anti-parallel
Strand 5
A
118 133anti-parallel
Strand 6
A
205 207anti-parallel
Strand 7
A
268 270parallel
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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
38 43first strand
Strand 2
B
5 10parallel
Strand 3
B
65 68parallel
Strand 4
B
205 221anti-parallel
Strand 5
B
118 133anti-parallel
Strand 6
B
186 190anti-parallel
Strand 7
B
147 150parallel
Strand 8
B
166 169parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
38 43first strand
Strand 2
B
5 10parallel
Strand 3
B
65 68parallel
Strand 4
B
205 221anti-parallel
Strand 5
B
268 270parallel
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There are 8 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
38 43first strand
Strand 2
C
5 10parallel
Strand 3
C
65 68parallel
Strand 4
C
205 221anti-parallel
Strand 5
C
118 133anti-parallel
Strand 6
C
186 190anti-parallel
Strand 7
C
147 150parallel
Strand 8
C
166 169parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
38 43first strand
Strand 2
C
5 10parallel
Strand 3
C
65 68parallel
Strand 4
C
205 221anti-parallel
Strand 5
C
268 270parallel
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There are 8 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
38 43first strand
Strand 2
D
5 10parallel
Strand 3
D
65 68parallel
Strand 4
D
205 221anti-parallel
Strand 5
D
118 133anti-parallel
Strand 6
D
186 190anti-parallel
Strand 7
D
147 150parallel
Strand 8
D
166 169parallel
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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
38 43first strand
Strand 2
D
5 10parallel
Strand 3
D
65 68parallel
Strand 4
D
205 221anti-parallel
Strand 5
D
268 270parallel
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