Analysis of interatomic Contacts of Structural Units in PDB entry:
9BH9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9BH9 entry

There are 4 chains in PDB entry 9BH9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 68VAL 892
B
 LYS 68VAL 892
X
 T 43 G 56
Y
 C 19 G 54
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 87 helices in PDB entry 9BH9. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
70 75Right-handed 310
Helix 2
AA2
A
77 88Right-handed alpha
Helix 3
AA3
A
93 100Right-handed alpha
Helix 4
AA4
A
104 108Right-handed 310
Helix 5
AA5
A
116 119Right-handed 310
Helix 6
AA6
A
120 121Right-handed 310
Helix 7
AA7
A
122 136Right-handed alpha
Helix 8
AA8
A
146 162Right-handed alpha
Helix 9
AA9
A
163 165Right-handed 310
Helix 10
AB1
A
180 184Right-handed 310
Helix 11
AB2
A
191 204Right-handed alpha
Helix 12
AB3
A
206 210Right-handed 310
Helix 13
AB4
A
217 223Right-handed 310
Helix 14
AB5
A
228 246Right-handed alpha
Helix 15
AB6
A
270 278Right-handed alpha
Helix 16
AB7
A
325 335Right-handed alpha
Helix 17
AB8
A
346 366Right-handed alpha
Helix 18
AB9
A
383 396Right-handed alpha
Helix 19
AC1
A
404 409Right-handed alpha
Helix 20
AC2
A
421 434Right-handed alpha
Helix 21
AC3
A
444 447Right-handed 310
Helix 22
AC4
A
470 478Right-handed alpha
Helix 23
AC5
A
479 482Right-handed 310
Helix 24
AC6
A
500 509Right-handed alpha
Helix 25
AC7
A
528 541Right-handed alpha
Helix 26
AC8
A
546 555Right-handed alpha
Helix 27
AC9
A
557 563Right-handed alpha
Helix 28
AD1
A
578 591Right-handed alpha
Helix 29
AD2
A
612 622Right-handed alpha
Helix 30
AD3
A
624 640Right-handed alpha
Helix 31
AD4
A
647 655Right-handed alpha
Helix 32
AD5
A
665 674Right-handed alpha
Helix 33
AD6
A
677 686Right-handed alpha
Helix 34
AD7
A
690 700Right-handed alpha
Helix 35
AD8
A
706 730Right-handed alpha
Helix 36
AD9
A
733 742Right-handed alpha
Helix 37
AE1
A
744 769Right-handed alpha
Helix 38
AE2
A
771 782Right-handed alpha
Helix 39
AE3
A
783 785Right-handed 310
Helix 40
AE4
A
798 802Right-handed 310
Helix 41
AE5
A
803 812Right-handed alpha
Helix 42
AE6
A
817 822Right-handed alpha
Helix 43
AE7
A
825 835Right-handed alpha
Helix 44
AE8
A
849 860Right-handed alpha
Helix 45
AE9
A
871 891Right-handed alpha
Helix 46
AF1
B
70 75Right-handed 310
Helix 47
AF2
B
77 87Right-handed alpha
Helix 48
AF3
B
93 101Right-handed alpha
Helix 49
AF4
B
122 136Right-handed alpha
Helix 50
AF5
B
146 162Right-handed alpha
Helix 51
AF6
B
163 165Right-handed 310
Helix 52
AF7
B
180 184Right-handed 310
Helix 53
AF8
B
191 204Right-handed alpha
Helix 54
AF9
B
206 208Right-handed 310
Helix 55
AG1
B
217 223Right-handed 310
Helix 56
AG2
B
228 246Right-handed alpha
Helix 57
AG3
B
270 278Right-handed alpha
Helix 58
AG4
B
325 335Right-handed alpha
Helix 59
AG5
B
346 368Right-handed alpha
Helix 60
AG6
B
383 397Right-handed alpha
Helix 61
AG7
B
404 409Right-handed alpha
Helix 62
AG8
B
421 434Right-handed alpha
Helix 63
AG9
B
444 447Right-handed 310
Helix 64
AH1
B
470 479Right-handed alpha
Helix 65
AH2
B
500 510Right-handed alpha
Helix 66
AH3
B
528 540Right-handed alpha
Helix 67
AH4
B
546 555Right-handed alpha
Helix 68
AH5
B
557 564Right-handed alpha
Helix 69
AH6
B
577 579Right-handed 310
Helix 70
AH7
B
580 592Right-handed alpha
Helix 71
AH8
B
612 622Right-handed alpha
Helix 72
AH9
B
624 640Right-handed alpha
Helix 73
AI1
B
647 655Right-handed alpha
Helix 74
AI2
B
665 675Right-handed alpha
Helix 75
AI3
B
677 688Right-handed alpha
Helix 76
AI4
B
690 700Right-handed alpha
Helix 77
AI5
B
706 730Right-handed alpha
Helix 78
AI6
B
733 742Right-handed alpha
Helix 79
AI7
B
744 770Right-handed alpha
Helix 80
AI8
B
773 782Right-handed alpha
Helix 81
AI9
B
783 785Right-handed 310
Helix 82
AJ1
B
790 799Right-handed 310
Helix 83
AJ2
B
803 813Right-handed alpha
Helix 84
AJ3
B
817 822Right-handed alpha
Helix 85
AJ4
B
825 835Right-handed alpha
Helix 86
AJ5
B
849 859Right-handed alpha
Helix 87
AJ6
B
871 891Right-handed alpha
Back to top of page

There are 9 sheets in PDB entry 9BH9. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
168 171first strand
Strand 2
A
186 190parallel
Strand 3
A
140 144parallel
Strand 4
A
212 215parallel
Strand 5
A
260 265parallel
Strand 6
A
111 114parallel
Strand 7
A
281 284parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
292 293first strand
Strand 2
A
490 496parallel
Strand 3
A
295 298parallel
Strand 4
A
301 304anti-parallel
Strand 5
A
309 312anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
292 293first strand
Strand 2
A
490 496parallel
Strand 3
A
456 459parallel
Strand 4
A
340 343parallel
Strand 5
A
439 442parallel
Strand 6
A
413 416parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
463 464first strand
Strand 2
A
467 468anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
595 598first strand
Strand 2
A
608 611anti-parallel
Back to list of sheets
Back to top of page

There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
168 171first strand
Strand 2
B
186 190parallel
Strand 3
B
139 144parallel
Strand 4
B
210 215parallel
Strand 5
B
260 265parallel
Strand 6
B
110 114parallel
Strand 7
B
280 284parallel
Back to list of sheets
Back to top of page

There are 8 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
309 312first strand
Strand 2
B
301 304anti-parallel
Strand 3
B
292 298anti-parallel
Strand 4
B
490 496parallel
Strand 5
B
456 459parallel
Strand 6
B
340 343parallel
Strand 7
B
439 442parallel
Strand 8
B
413 416parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
463 464first strand
Strand 2
B
467 468anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
595 598first strand
Strand 2
B
608 611anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il