Analysis of interatomic Contacts of Structural Units in PDB entry:
9BHA


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9BHA entry

There are 4 chains in PDB entry 9BHA (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 67VAL 892
B
 ASP 67VAL 892
X
 T 44 G 56
Y
 C 19 G 54
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 84 helices in PDB entry 9BHA. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
70 75Right-handed 310
Helix 2
AA2
A
77 88Right-handed alpha
Helix 3
AA3
A
93 100Right-handed alpha
Helix 4
AA4
A
104 108Right-handed 310
Helix 5
AA5
A
120 136Right-handed alpha
Helix 6
AA6
A
146 162Right-handed alpha
Helix 7
AA7
A
163 165Right-handed 310
Helix 8
AA8
A
180 184Right-handed 310
Helix 9
AA9
A
191 204Right-handed alpha
Helix 10
AB1
A
206 208Right-handed 310
Helix 11
AB2
A
217 223Right-handed 310
Helix 12
AB3
A
228 246Right-handed alpha
Helix 13
AB4
A
270 278Right-handed alpha
Helix 14
AB5
A
325 335Right-handed alpha
Helix 15
AB6
A
346 368Right-handed alpha
Helix 16
AB7
A
383 394Right-handed alpha
Helix 17
AB8
A
395 397Right-handed 310
Helix 18
AB9
A
404 409Right-handed alpha
Helix 19
AC1
A
421 434Right-handed alpha
Helix 20
AC2
A
444 447Right-handed 310
Helix 21
AC3
A
470 479Right-handed alpha
Helix 22
AC4
A
480 482Right-handed 310
Helix 23
AC5
A
501 510Right-handed alpha
Helix 24
AC6
A
528 541Right-handed alpha
Helix 25
AC7
A
546 555Right-handed alpha
Helix 26
AC8
A
557 568Right-handed alpha
Helix 27
AC9
A
578 592Right-handed alpha
Helix 28
AD1
A
612 621Right-handed alpha
Helix 29
AD2
A
624 640Right-handed alpha
Helix 30
AD3
A
647 655Right-handed alpha
Helix 31
AD4
A
665 675Right-handed alpha
Helix 32
AD5
A
677 688Right-handed alpha
Helix 33
AD6
A
690 699Right-handed alpha
Helix 34
AD7
A
706 730Right-handed alpha
Helix 35
AD8
A
733 742Right-handed alpha
Helix 36
AD9
A
744 770Right-handed alpha
Helix 37
AE1
A
771 783Right-handed alpha
Helix 38
AE2
A
790 792Right-handed 310
Helix 39
AE3
A
793 801Right-handed alpha
Helix 40
AE4
A
803 813Right-handed alpha
Helix 41
AE5
A
817 822Right-handed alpha
Helix 42
AE6
A
825 837Right-handed alpha
Helix 43
AE7
A
849 860Right-handed alpha
Helix 44
AE8
A
871 888Right-handed alpha
Helix 45
AE9
B
70 75Right-handed 310
Helix 46
AF1
B
77 88Right-handed alpha
Helix 47
AF2
B
93 101Right-handed alpha
Helix 48
AF3
B
120 136Right-handed alpha
Helix 49
AF4
B
146 162Right-handed alpha
Helix 50
AF5
B
180 184Right-handed 310
Helix 51
AF6
B
191 204Right-handed alpha
Helix 52
AF7
B
206 208Right-handed 310
Helix 53
AF8
B
217 223Right-handed 310
Helix 54
AF9
B
228 246Right-handed alpha
Helix 55
AG1
B
270 278Right-handed alpha
Helix 56
AG2
B
325 335Right-handed alpha
Helix 57
AG3
B
346 367Right-handed alpha
Helix 58
AG4
B
383 397Right-handed alpha
Helix 59
AG5
B
404 409Right-handed alpha
Helix 60
AG6
B
421 434Right-handed alpha
Helix 61
AG7
B
444 447Right-handed 310
Helix 62
AG8
B
470 479Right-handed alpha
Helix 63
AG9
B
500 510Right-handed alpha
Helix 64
AH1
B
528 541Right-handed alpha
Helix 65
AH2
B
546 555Right-handed alpha
Helix 66
AH3
B
557 565Right-handed alpha
Helix 67
AH4
B
578 592Right-handed alpha
Helix 68
AH5
B
612 622Right-handed alpha
Helix 69
AH6
B
624 640Right-handed alpha
Helix 70
AH7
B
647 655Right-handed alpha
Helix 71
AH8
B
665 674Right-handed alpha
Helix 72
AH9
B
677 688Right-handed alpha
Helix 73
AI1
B
690 698Right-handed alpha
Helix 74
AI2
B
706 730Right-handed alpha
Helix 75
AI3
B
733 742Right-handed alpha
Helix 76
AI4
B
746 770Right-handed alpha
Helix 77
AI5
B
771 782Right-handed alpha
Helix 78
AI6
B
790 795Right-handed alpha
Helix 79
AI7
B
796 799Right-handed 310
Helix 80
AI8
B
803 815Right-handed alpha
Helix 81
AI9
B
817 824Right-handed alpha
Helix 82
AJ1
B
825 837Right-handed alpha
Helix 83
AJ2
B
849 861Right-handed alpha
Helix 84
AJ3
B
871 891Right-handed alpha
Back to top of page

There are 8 sheets in PDB entry 9BHA. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
168 171first strand
Strand 2
A
186 190parallel
Strand 3
A
139 144parallel
Strand 4
A
210 215parallel
Strand 5
A
260 264parallel
Strand 6
A
111 114parallel
Strand 7
A
281 284parallel
Back to list of sheets
Back to top of page

There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
309 312first strand
Strand 2
A
301 304anti-parallel
Strand 3
A
292 298anti-parallel
Strand 4
A
490 495parallel
Strand 5
A
456 459parallel
Strand 6
A
340 343parallel
Strand 7
A
439 442parallel
Strand 8
A
413 416parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
463 464first strand
Strand 2
A
467 468anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
595 599first strand
Strand 2
A
607 611anti-parallel
Back to list of sheets
Back to top of page

There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
168 171first strand
Strand 2
B
186 190parallel
Strand 3
B
139 144parallel
Strand 4
B
210 215parallel
Strand 5
B
260 264parallel
Strand 6
B
111 114parallel
Strand 7
B
281 284parallel
Back to list of sheets
Back to top of page

There are 8 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
309 312first strand
Strand 2
B
301 304anti-parallel
Strand 3
B
292 298anti-parallel
Strand 4
B
490 496parallel
Strand 5
B
456 459parallel
Strand 6
B
340 343parallel
Strand 7
B
439 442parallel
Strand 8
B
413 416parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
463 464first strand
Strand 2
B
467 468anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
595 598first strand
Strand 2
B
608 611anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il