Analysis of interatomic Contacts of Structural Units in PDB entry:
9BHB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9BHB entry

There are 3 chains in PDB entry 9BHB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
H
 VAL 2SER 112
K
 ILE 2THR 109
A
 SER 579ARG 718
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 8 helices in PDB entry 9BHB. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
H
28 32Right-handed 310
Helix 2
AA2
H
83 87Right-handed 310
Helix 3
AA3
K
79 83Right-handed 310
Helix 4
AA4
A
580 600Right-handed alpha
Helix 5
AA5
A
622 640Right-handed alpha
Helix 6
AA6
A
664 672Right-handed alpha
Helix 7
AA7
A
674 693Right-handed alpha
Helix 8
AA8
A
704 717Right-handed alpha
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There are 7 sheets in PDB entry 9BHB. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
3 6first strand
Strand 2
H
22 25anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
10 12first strand
Strand 2
H
107 111parallel
Strand 3
H
88 95anti-parallel
Strand 4
H
34 40anti-parallel
Strand 5
H
44 51anti-parallel
Strand 6
H
57 59anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
10 12first strand
Strand 2
H
107 111parallel
Strand 3
H
88 95anti-parallel
Strand 4
H
100 103anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
17 20first strand
Strand 2
H
77 82anti-parallel
Strand 3
H
68 72anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
K
4 5first strand
Strand 2
K
24 25anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
K
10 12first strand
Strand 2
K
102 105parallel
Strand 3
K
85 90anti-parallel
Strand 4
K
33 38anti-parallel
Strand 5
K
44 48anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
K
19 20first strand
Strand 2
K
72 75anti-parallel
Strand 3
K
62 65anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il