Analysis of interatomic Contacts of Structural Units in PDB entry:
9BHF


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9BHF entry

There are 2 chains in PDB entry 9BHF (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET -1ASN 305
B
 MET -1ASN 305
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 33 helices in PDB entry 9BHF. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
15 32Right-handed alpha
Helix 2
AA2
A
48 59Right-handed alpha
Helix 3
AA3
A
67 74Right-handed 310
Helix 4
AA4
A
75 83Right-handed 310
Helix 5
AA5
A
89 99Right-handed alpha
Helix 6
AA6
A
100 113Right-handed alpha
Helix 7
AA7
A
137 142Right-handed 310
Helix 8
AA8
A
151 162Right-handed alpha
Helix 9
AA9
A
169 171Right-handed 310
Helix 10
AB1
A
172 179Right-handed alpha
Helix 11
AB2
A
189 195Right-handed alpha
Helix 12
AB3
A
196 200Right-handed 310
Helix 13
AB4
A
220 225Right-handed alpha
Helix 14
AB5
A
227 254Right-handed alpha
Helix 15
AB6
A
255 263Right-handed alpha
Helix 16
AB7
A
272 279Right-handed alpha
Helix 17
AB8
A
279 303Right-handed alpha
Helix 18
AB9
B
15 32Right-handed alpha
Helix 19
AC1
B
48 58Right-handed alpha
Helix 20
AC2
B
67 74Right-handed 310
Helix 21
AC3
B
75 83Right-handed 310
Helix 22
AC4
B
89 99Right-handed alpha
Helix 23
AC5
B
100 113Right-handed alpha
Helix 24
AC6
B
137 142Right-handed 310
Helix 25
AC7
B
151 161Right-handed alpha
Helix 26
AC8
B
169 171Right-handed 310
Helix 27
AC9
B
172 179Right-handed alpha
Helix 28
AD1
B
189 196Right-handed alpha
Helix 29
AD2
B
197 200Right-handed 310
Helix 30
AD3
B
220 226Right-handed alpha
Helix 31
AD4
B
227 263Right-handed alpha
Helix 32
AD5
B
272 279Right-handed alpha
Helix 33
AD6
B
279 303Right-handed alpha
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There are 7 sheets in PDB entry 9BHF. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3 8first strand
Strand 2
A
36 41parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
63 66first strand
Strand 2
A
211 219anti-parallel
Strand 3
A
116 131anti-parallel
Strand 4
A
184 188anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
63 66first strand
Strand 2
A
211 219anti-parallel
Strand 3
A
116 131anti-parallel
Strand 4
A
203 205anti-parallel
Strand 5
A
266 268parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
145 148first strand
Strand 2
A
164 167parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
36 41first strand
Strand 2
B
3 8parallel
Strand 3
B
63 66parallel
Strand 4
B
211 219anti-parallel
Strand 5
B
116 131anti-parallel
Strand 6
B
184 188anti-parallel
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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
36 41first strand
Strand 2
B
3 8parallel
Strand 3
B
63 66parallel
Strand 4
B
211 219anti-parallel
Strand 5
B
116 131anti-parallel
Strand 6
B
203 205anti-parallel
Strand 7
B
266 268parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
145 148first strand
Strand 2
B
164 167parallel
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